Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0953 ATGAAGAAACTAGAAGTGGAAGTAACCTCCAAAGAAATCATCAAACCTTCTTCTCCAACTCCAAAGCACCTTCGATGTTACCAACTCTCTTTTCTTGATCAAATATCTCCCATGGTCTACAACCCCACCGTTCTCTTCTACTCTCTCGACCAAATCACCCAATTCAACTTCAATGCAACCACCACCACCATCTCCAACCACCTCAAGAAATCTCTCTCCCTTGCCCTAACCCATTTCTACCCTCTTGCAGGGCGGCTCGACGGTGGCAAGGGTTTCATCGACTGTGCCGACGACGGCGTACCTTACATAGAAACAACAGTGAAGAATTGCAAGCTTGCTGAAGTTACTCATAATCCAATTCCTGGAGAACTGAACATTCTGGTTCCGTTCAAACTGGACGACATAACCAACATCATATTCGGAGTACAGCTGAACGTTTTCGACTGCGGCGGCATTGCAATCGGCGCGTGTCTTTCCCACCAAATCGCCGACGCCTTATCCTTCTTCAACTTCCTTAATCATTGGGCTTCCATTGCCACCAAAAAACGCAATCCACCAACTCCACAGTTTCTTTCATCAAAGCTTTTCCCACCGATAAACATCTCCGGCTTCGATCCGAGAAGCGGCATAACGACGGAGAACGTGGCGTGCAAGTTATTCTTGTTTGATTCAAGTGTTGTTGAAACCCTAAGAGAAAATTACGCAATGGAAAACAATAATGATGGGGAGAGAAAACCAACTCGTGTTGAGGCTTTATCTGCGTTCATTTGGGGCCGTTATGTGGCAGTTACAACAGAATGTTATGAAGATCCTGAGAAGAAGAAGAAGAAGAAGAGGAGAATGTATGCTGTGGTCCATGCTGTGAATCTAAGGCCGAAGATGGAACCGCCGTTGCCGGAAGATTCGTTTGGAAACTACTACCGAATCACCATGACGATTCCATCTTTGAATGCTCAACAAAAGTGTTATGGACTAGTGAAGCAGGTGAGGGATGAAATAAAGAAGATTGACAAGGAATACATTAGAAAACTTCAAGAGGGAAATGAGCATTTGGATTTCCTTAAGGATAGTTCAGAAAGGGTGCTTGTGAAGGGAGAATTCGTTTCATTTAGCTTCACAAGTCTATGTAGGTTTCCTCTCTATGATGCTGATTTTGGTTGGGGAAAACCAACATGGGTAGGTTCACCTGCCTTAACTTTTAAGAATCTTGTTGTGTTTTGTGACACTAAGAATGGCGGTGGCATTGAAGCCTACGTTAGCTTGAAGATGGAAGACATGGAAAAATTTGAAGCAGATAAGGAGTTGCTTGCTTGTGTGAACAAAAATAAGCCATAG 1335 0.439 MKKLEVEVTSKEIIKPSSPTPKHLRCYQLSFLDQISPMVYNPTVLFYSLDQITQFNFNATTTTISNHLKKSLSLALTHFYPLAGRLDGGKGFIDCADDGVPYIETTVKNCKLAEVTHNPIPGELNILVPFKLDDITNIIFGVQLNVFDCGGIAIGACLSHQIADALSFFNFLNHWASIATKKRNPPTPQFLSSKLFPPINISGFDPRSGITTENVACKLFLFDSSVVETLRENYAMENNNDGERKPTRVEALSAFIWGRYVAVTTECYEDPEKKKKKKRRMYAVVHAVNLRPKMEPPLPEDSFGNYYRITMTIPSLNAQQKCYGLVKQVRDEIKKIDKEYIRKLQEGNEHLDFLKDSSERVLVKGEFVSFSFTSLCRFPLYDADFGWGKPTWVGSPALTFKNLVVFCDTKNGGGIEAYVSLKMEDMEKFEADKELLACVNKNKP* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0953 444 Pfam Transferase family 5 435 - -
Amo20g0953 444 PANTHER F21J9.9 3 442 - -
Amo20g0953 444 Gene3D - 3 202 IPR023213 -
Amo20g0953 444 Gene3D - 212 439 IPR023213 -
Amo20g0953 444 PANTHER ANTHRANILATE N-BENZOYLTRANSFERASE 3 442 - -
Amo20g0953 444 Coils Coil 326 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0953 Amo-Chr20 15892711 15897962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0953 4 430 Monolignol Biosynthesis Gene Families AT5G48930 25.486 8.59e-33 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0953 K13065 - gmx:102670206 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0953 20 15892711 15897962 Amo20g0953 20 15892711 15897962 ECH