Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0925 ATGGAAACAAGCACCAAAGAAGGCTTAGAAATCAAGAAAGTGGATTGTGATGCATCGGAGATTGAGTATGTTAGTTATGGTGGCGAGCACCACCTCCCCCTTATCATGAACCTAGTCGACCAAGAACTCAGCGAGCCGTACTCCATATTCACCTATCGTTACTTTGTATATCTCTGGCCTCAACTCTCTTTCCTGGCATTCCACAAGGGTAAATGTGTCGGCACGGTGGTTTGTAAGATGGGCGACCATCGAAACATTTCCAGAGGATACATTGCCATGTTGGTTGTGATCAAGCCCTATAGAGGAAAAGGCATTGCTACAGAACTTGTTACTCGGTCTATTAAGGTGATGATGGAATCTGGTTGTGAAGAAGTTACTCTGGAATCAGAAGTTACAAACAAAGGAGCATTGGCACTCTATGGTCGCCTTGGCTTTATTAGGGCTAAGAGGCTCTTCCATTATTATTTGAATGGAGTCGATGCTTTCCGGCTCAAACTGCGATTCCCTCGGCCGGAGCTGCACCCATCTCTGCCTGTGATGTCTGATAAATATGGTAGTAGTCATATACCAAGTGATCATGATAATTCAGCATTTGAACAATGA 603 0.4444 METSTKEGLEIKKVDCDASEIEYVSYGGEHHLPLIMNLVDQELSEPYSIFTYRYFVYLWPQLSFLAFHKGKCVGTVVCKMGDHRNISRGYIAMLVVIKPYRGKGIATELVTRSIKVMMESGCEEVTLESEVTNKGALALYGRLGFIRAKRLFHYYLNGVDAFRLKLRFPRPELHPSLPVMSDKYGSSHIPSDHDNSAFEQ* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0925 200 Pfam Acetyltransferase (GNAT) family 56 145 IPR000182 GO:0016407
Amo20g0925 200 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 19 169 IPR000182 GO:0016407
Amo20g0925 200 Gene3D - 28 181 - -
Amo20g0925 200 PANTHER N-ALPHA-ACETYLTRANSFERASE 30 10 168 IPR044542 GO:0004596|GO:0017196
Amo20g0925 200 CDD NAT_SF 63 128 - -
Amo20g0925 200 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 29 170 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0925 Amo-Chr20 15341083 15342853 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Amo20g0925 Acetyltransf_1 4.4e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0925 K00670 - gmx:100806790 342.043