Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0890 ATGAAGTACTTGCCATCATTGTGCTCATTTTCACTTATCTCCATATTTCTAGCACTTCTTTCTCTTGGAACAAACTCACCATTTGAAAGCATCTTCTCTTCTTCTTTCTCTTTATGGTCACTTCTTACTCTCTTTCTCACCACAGCCTTTCCTCTTCTTGCTATCTCCCTTAACTATTGGCTTGTCCCAGGAGGCTTTGCATGGAGAAACTACCAAAAACTTTACAAGGACTATGAAAAAATCCATGGTCCTATGGGCTGGCCCATACTGGGGACTTTGCCCTACATGGGCTCCCTAGCCCATAGGAAACTCGCTGCCATGGCCGTTTCGCTAAATGCGAAAAGACTCATGGCAGTGAGTTTAGGGTCCCAACCTGTTATCATAAGCAGTCACCCTGACACCGCAAGACAAATTCTATGTGGTTCTAGTTTTTCAGATCGTCCAGTCAAACAGTCAGCAAGGTTGCTAATGTTTGAGCGTGCCATAGGGTTTGCACCCTATGGCACGTACTGGCACCACCTTCGCAAGGTAGCGGCCACGCACATGTTCTCTCCACGAAGTATTTCCGGCCTAGAGAGTCTCAGGCAAGAAGTGGCCGATGGAATGGTGGAGAGAACGTGGAAGGAGATGGAAGAGAAAGGGGTGGTAGAAGTTAGGGGAATATTACAAGAAGGATCTCTTAACAATGTTTTGGAGAGTGTGTTTGGTAGTAATAATAATTCTATGAGTTCAAAAACAAGAGAGGTTTTGGATGAAATGGTTAAAGAAGGGTATGAGTTGATTTCCATGTTCAACTGGGAAGATTATTTCCCTTTTAAGTTCTTAGACTTCTATGGAGTGAAAAGAAGGTGTCAAAAATTGGCGGCTAAGGTCAACACTGTGGTGGGTCAAATTGTTGAAAACAGAAAAAAATCTGAGGATTTTGTTGGACAGAGTGATTTTCTTAGCGCTTTGCTTTCTTTGCCCAAAGAAGAAAGGTTTAGTGATTCAGATATGGTGGCTATTTTGTGGGAAATGATATTCCGGGGAACAGATACAGTTGCTATACTCCTTGAATGGACCATGGCTAGGCTGGTGTTACACCCAGACATACAAACCAAAGCCCGCCGGGAGATCGACGATTGCGTGGGCCCGAACGGTCACGTGCAGGACACGGACATCCCAAATCTCCCTTACCTCCAAGCCATAGTGAAGGAGGTTCTCCGAATGCATCCACCAGGTCCATTGCTCTCATGGGCCCGGCTTGCAATCCATGATGTCCAGATAGACAAAGTTTTAGTGCCACGTGGCACAACTGCAATGGTCAACATGTGGGCAATAGCACATGACTCATCTGTATGGGAAGATCCATGGGATTTTAACCCCGAAAGATTCATGAAGGAAGATGTGTCCGTCATGGGATCGGACATGAGGCTCGCACCCTTCGGTGCTGGCCGAAGGGTGTGCCCCGGTAAGGCACTGGGCTTGGCAACGGTTCATCTCTGGCTTGCTAAACTTCTCCACCATTACATATGGGTTCCGGTGCAGCCTGTGGATCTTTCAGAATGCCTCAAGCTCTCTAATGAGATGAAAAACCCTTTAAGGTGCCAAGTGATTTGCAGATAG 1605 0.4617 MKYLPSLCSFSLISIFLALLSLGTNSPFESIFSSSFSLWSLLTLFLTTAFPLLAISLNYWLVPGGFAWRNYQKLYKDYEKIHGPMGWPILGTLPYMGSLAHRKLAAMAVSLNAKRLMAVSLGSQPVIISSHPDTARQILCGSSFSDRPVKQSARLLMFERAIGFAPYGTYWHHLRKVAATHMFSPRSISGLESLRQEVADGMVERTWKEMEEKGVVEVRGILQEGSLNNVLESVFGSNNNSMSSKTREVLDEMVKEGYELISMFNWEDYFPFKFLDFYGVKRRCQKLAAKVNTVVGQIVENRKKSEDFVGQSDFLSALLSLPKEERFSDSDMVAILWEMIFRGTDTVAILLEWTMARLVLHPDIQTKARREIDDCVGPNGHVQDTDIPNLPYLQAIVKEVLRMHPPGPLLSWARLAIHDVQIDKVLVPRGTTAMVNMWAIAHDSSVWEDPWDFNPERFMKEDVSVMGSDMRLAPFGAGRRVCPGKALGLATVHLWLAKLLHHYIWVPVQPVDLSECLKLSNEMKNPLRCQVICR* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0890 534 PANTHER CYTOCHROME P450 78A7-RELATED 35 534 - -
Amo20g0890 534 Pfam Cytochrome P450 82 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g0890 534 PRINTS P450 superfamily signature 342 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g0890 534 PRINTS P450 superfamily signature 395 406 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g0890 534 PRINTS P450 superfamily signature 473 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g0890 534 PRINTS P450 superfamily signature 482 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g0890 534 Gene3D Cytochrome P450 69 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g0890 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 475 484 IPR017972 GO:0005506|GO:0016705
Amo20g0890 534 PRINTS E-class P450 group I signature 110 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g0890 534 PRINTS E-class P450 group I signature 331 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g0890 534 PRINTS E-class P450 group I signature 351 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g0890 534 PRINTS E-class P450 group I signature 394 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g0890 534 PRINTS E-class P450 group I signature 436 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g0890 534 PRINTS E-class P450 group I signature 472 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g0890 534 PRINTS E-class P450 group I signature 482 505 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g0890 534 SUPERFAMILY Cytochrome P450 83 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo20g0890 534 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 35 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0890 Amo-Chr20 14682481 14685157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0890 13 534 Cytochrome P450 AT1G74110 49.909 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0890 - - ahf:112715014 902.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0890 20 14682481 14685157 Amo20g0890 20 14682481 14685157 ECH
Amo20g0890 20 14682481 14685157 Amo10g0407 10 4166514 4168480 hybridization