Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0818 ATGGAAAAAATTTTGTGTTATTCATTATTTCTGTTTCAAATTCATTTCCTTTCACATAGCAGCAGGGCCAATAATAATAATAATAATTATAACAAAAACAAGGTTCCAGCAATAATAGTGTTTGGAGACTCATCAGTTGATTCTGGTAACAACAACTTCATTCCAACAATTGCAATGAGCAACTTTGAGCCTTATGGACGTGATTTTCCTGATGGAAACTCAACAGGGAGATTCTCAAATGGAAAAATTGCCCCTGATTTTATCTCTGGAGCCTTTGGTCTTAGGCCAATTGATGTGATACCTCTATGGAAAGAAATTGAGTACTATAAGGAGTACCAAAGAAAATTAAGGGCACATCTTGGTGAGGAGAAAGCTAATGAAATATTGAAAGAAGCATTATATTTAGTTAGCATCGGTACAAATGATTTTCTAGAGAACTATTACACACTCCCTCAGCATAGGTGCCAATTCAGGGAAGTTCAACAATACGAGAATTTTTTAATTGGACTAGCTGAGAATTTTTTCAAGGAAATATATCATCTTGGAGCAAGGAAAATTTCTCTGACAGGGTTGCCTCCTATGGGGTGTTTACCATTGGAAAGAGCCATAAACATTATGGAATTTCATGGTTGCGTGGAGGAATACAATAACGTGGCTTTGGAATTTAATGGTAAATTGAGATGGTTAGTGAGTAAGCTTAACAAGGACCTTCCTGGGCTTCAATTAGTTGATGCAAATGCATATGATATCTTATTGCAGATTGTTACACAGCCTTCTCGTTTTGGTTTTGAGGTTGCGCAAGTGGGATGTTGTGGAACAGGGAGATTTGAGATGAGTTACTTATGCGACCCAAAAAGTCCATTTGCATGCTCAGATGCAAATAAATATGTATTTTGGGATGCCTTTCACCCTTCGGAGAAAACAAGTCAGATAGTCTCTAACTATTTAATTGAAAAATATTTAGCAAAGTTCCGTTAG 978 0.364 MEKILCYSLFLFQIHFLSHSSRANNNNNNYNKNKVPAIIVFGDSSVDSGNNNFIPTIAMSNFEPYGRDFPDGNSTGRFSNGKIAPDFISGAFGLRPIDVIPLWKEIEYYKEYQRKLRAHLGEEKANEILKEALYLVSIGTNDFLENYYTLPQHRCQFREVQQYENFLIGLAENFFKEIYHLGARKISLTGLPPMGCLPLERAINIMEFHGCVEEYNNVALEFNGKLRWLVSKLNKDLPGLQLVDANAYDILLQIVTQPSRFGFEVAQVGCCGTGRFEMSYLCDPKSPFACSDANKYVFWDAFHPSEKTSQIVSNYLIEKYLAKFR* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0818 325 Pfam GDSL-like Lipase/Acylhydrolase 38 316 IPR001087 GO:0016788
Amo20g0818 325 Gene3D SGNH hydrolase 23 322 IPR036514 -
Amo20g0818 325 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 4 97 - -
Amo20g0818 325 CDD SGNH_plant_lipase_like 36 320 IPR035669 -
Amo20g0818 325 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 97 324 - -
Amo20g0818 325 SUPERFAMILY SGNH hydrolase 9 318 - -
Amo20g0818 325 PANTHER GDSL ESTERASE/LIPASE EXL3 4 97 - -
Amo20g0818 325 PANTHER GDSL ESTERASE/LIPASE EXL3 97 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0818 Amo-Chr20 12157306 12161692 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0818 5 318 Pollen Coat Proteome AT1G75910 30.199 2.27e-48 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0818 - - gmx:100819256 511.916