Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0814 ATGTCTAATGGGAGCCTAGAAACTTTGTTGCACAACACTATTGAAGATAGCGAGTTCACAAATATGAGTCTGAACCTTATGCAAAGGGTAAATATTGCTCTTGATGTAACTTTTGTGTTGGATTATATTCATAATGATTCAGGAGAAGCCGTAATTCATTGTGATATTAAGCCTGGCAATGTGCTTCTTGATGATGATATTGTTTTCCACTTGGGAGACTTTGGTCTAACTAGACTTGTTCAGTTGTTCAAGGGGACAAAAACTATTCTACTAGAACCATCGGATATGTTCCACCAAGTAAAAGTAAAAAAAAAAACAACAAATTACATGTTTGGTGAAAATCTAAGCCTACACAAATTTTGTAAAAAGATAATTCCAAAAGGAATCATTGAGATTGTTGATTTAAGATTGCTAACTTTGTATAGTGAAGGAGAAAGAAAGATCACGATTGGAGTTGCATGTTCTCAAGAGTTTCTCACTCGACCGATGAACATTAAAGATGTCATAATGGAGCTGCATGCAATTAAACACAAACTCCTTCCATAA 546 0.3462 MSNGSLETLLHNTIEDSEFTNMSLNLMQRVNIALDVTFVLDYIHNDSGEAVIHCDIKPGNVLLDDDIVFHLGDFGLTRLVQLFKGTKTILLEPSDMFHQVKVKKKTTNYMFGENLSLHKFCKKIIPKGIIEIVDLRLLTLYSEGERKITIGVACSQEFLTRPMNIKDVIMELHAIKHKLLP* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0814 181 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 103 179 - -
Amo20g0814 181 SUPERFAMILY Protein kinase-like (PK-like) 1 85 IPR011009 -
Amo20g0814 181 Pfam Protein kinase domain 2 100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g0814 181 Gene3D Transferase(Phosphotransferase) domain 1 1 112 - -
Amo20g0814 181 PANTHER LRR RECEPTOR-LIKE KINASE 1 83 - -
Amo20g0814 181 ProSitePatterns Serine/Threonine protein kinases active-site signature. 51 63 IPR008271 GO:0004672|GO:0006468
Amo20g0814 181 ProSiteProfiles Protein kinase domain profile. 1 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g0814 181 PANTHER LRR RECEPTOR-LIKE KINASE 103 179 - -
Amo20g0814 181 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0814 Amo-Chr20 12006141 12007076 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0814 1 180 Receptor kinase-like Gene Family AT3G47580 30.137 4.15e-25 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Amo20g0814 Pkinase 1.9e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0814 - - ahf:112766919 231.876