Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0810 ATGGCTGCTTCACTTGACACTCAGAACAAAAATGAAATGCCAGTTAAACATGTTGTGATCCACATGCATGGTACTAGTGATGCAGAAGCAGAAAAGGCAACTCAAGGAACTGAAGGAAACAATAACACTACTGACTACTCTCAAAGAGCACAGTGGCTCCGAGCAGCAGTGCTCGGAGCCAATGATGGACTTGTGTCAGTGGCATCACTCATGATGGGTGTTGGAGCTGTGAACAAGGACATTGCAGCCATGCTCCTAGCCGGATTCGCGGGGCTAATAGCCGGAGCATGCAGCATGGCAATTGGAGAATTTGTCTCTGTCTACACGCAACTAGACATAGAAGTAGCTCAAATAAAAAGAGAAAGGGAACTCAACAATGAATTRGAGACAAGAGAAGGTGGTAGTGAAGAGGAGARGCTGCCGAATCCTTTTCAAGCTGCGATAGCGTCTGCAGTCGCATTTTCTGTTGGTGCAGCRGTGCCACTGATAGCAGCAGTGTTTATAAGAGAGTATAAGATCAGGGTTGGAGTTGTTGCTGCTGTGTCTAGCTTGGCATTGTTGGTATTTGGAGGGGTAGGAGCAGTGCTTGGAAAAACTCCAGTGAGAAGGTCTTGTATCAGAGTTCTGATTGGAGGTTGGTTGGCTATGGCTATTACTTTTGGCCTCACCAAGTTAATAAGCTTAAAGGGAATGTAA 696 0.4583 MAASLDTQNKNEMPVKHVVIHMHGTSDAEAEKATQGTEGNNNTTDYSQRAQWLRAAVLGANDGLVSVASLMMGVGAVNKDIAAMLLAGFAGLIAGACSMAIGEFVSVYTQLDIEVAQIKRERELNNELETREGGSEEEXLPNPFQAAIASAVAFSVGAAVPLIAAVFIREYKIRVGVVAAVSSLALLVFGGVGAVLGKTPVRRSCIRVLIGGWLAMAITFGLTKLISLKGM* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0810 231 MobiDBLite consensus disorder prediction 30 45 - -
Amo20g0810 231 MobiDBLite consensus disorder prediction 24 45 - -
Amo20g0810 231 CDD Nodulin-21 51 200 - -
Amo20g0810 231 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 1 227 IPR008217 GO:0005384|GO:0030026
Amo20g0810 231 Coils Coil 111 131 - -
Amo20g0810 231 Pfam VIT family 53 129 IPR008217 GO:0005384|GO:0030026
Amo20g0810 231 Pfam VIT family 135 223 IPR008217 GO:0005384|GO:0030026
Amo20g0810 231 PANTHER VACUOLAR IRON TRANSPORTER-LIKE PROTEIN 1 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0810 Amo-Chr20 11921118 11922280 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0810 38 231 Nodulin-like Gene Family AT3G43660 63.107 2.52e-88 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0810 K22736 - gmx:100817158 263.462