Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0805 ATGGCAATGCCAGTGGTGAGTGAAATTTTCTGTATTCTGGGTTCTATTGTCTTGACTCCATCGTGGCTCGCTTTTTCTGCCTCTGCCTCTGCTTCTGCGTCCGATGCCTTCTTTGTTTTTGGTGTTCTTCTTCTGACCTTGTCTAAATGTGCGTCTTGCTTCTCTTCCATTGTCCAAGCTGAGCTAGAAAATCGGCCCGTTAAGAAAGCCCAAGAGAGTGGATCACCCACCAAGATGGATGACTTGTCCAAGAGCCAGATGTTTGTGATTCATGGTGTTGCTGCAGTTGGCTCTGTGGCTTTTGCTTCTGCTCTCACATATCCCCTCGACACCATGAAAGTCCTCACTCAGGTTGCTTCTAGTTCCGGTAAACAATTGAATGCTGCCGAGCTCTTGCTTAGAATTCTCACTCTCTCTGGTCATTCAGGTCTGTTTAGTGGTTATGGATCGTTAGCACTTGGAAGGACTCTTGGTCTCGGAGCTCGATTTGGGGTCTATGAAATCATCACTGCCTTTTATAAGGATGGGCTGGAAGATAATTATGTCTCTGCTTCTGATGCTCTTTTGGCTGGAATGGCAGCTGGTGCTGTAGAGGCTTTGATAAGCTCTCCATTTGAACTTATCAAGCTTCGTGAACAGGTTTCCTCAGCTTCATACATTCCGAACTCTACTTTTGCTTTGGACAAGGGAGCCCAACCACCTTTAATTTCAAGATTACTGAGTGGCTGTTATCCTGACAAGAGATCCTTGAACCAATATGTCGGTCTCATCTCTACCCTATCTACCAAAAATACTAATGTGACAAGTGCACTGCTGGAGTATCCTTGGATGATGACAGGATCTGGGAAGCCACCATCAGTTTGCAATGTCAGAAGGCCATCTGATATTATATCATTGGAAGGATGGGGCGCATTATGGAGAGGTCTTCGTTCGGGAATTGCTCGAGATTCTGTGTTTGGTGGTGTATTTTTCTCAAGCTGGCAGTTTCTGCATCAAGCAATGCTTGATTGGAAGGCTGTAGGGATGGATCCTCCGCCCAGGTCAGATGAAGAAGTTGGTCCATTGTCTCCTTTATTTGTTAGTATTGCTGCTGGATTGTCAGCTTCAGTTGCTGCTGCGGCTTCTCATGCCTTTGATACTACAAGAACTAGATCACAGTGCACTGTGCTACCAAAGTATGTTTCAATGGAGAGAAGGCTCCTGAAGTGGAAACAGCCAGGAAACAAGTTTGAAAGATATACCGGGATCCATCCTTCTGACAGGAATCTATTGTTCCGTGGTCTTCGGTGGCGGATGGCTCGCTCTGGGCTTGCATCATTCATGATTGTAGGAAGTTATTTCTTCGCTGTCGATCATCTTGCTTCTAATTTGACTTGA 1377 0.4568 MAMPVVSEIFCILGSIVLTPSWLAFSASASASASDAFFVFGVLLLTLSKCASCFSSIVQAELENRPVKKAQESGSPTKMDDLSKSQMFVIHGVAAVGSVAFASALTYPLDTMKVLTQVASSSGKQLNAAELLLRILTLSGHSGLFSGYGSLALGRTLGLGARFGVYEIITAFYKDGLEDNYVSASDALLAGMAAGAVEALISSPFELIKLREQVSSASYIPNSTFALDKGAQPPLISRLLSGCYPDKRSLNQYVGLISTLSTKNTNVTSALLEYPWMMTGSGKPPSVCNVRRPSDIISLEGWGALWRGLRSGIARDSVFGGVFFSSWQFLHQAMLDWKAVGMDPPPRSDEEVGPLSPLFVSIAAGLSASVAAAASHAFDTTRTRSQCTVLPKYVSMERRLLKWKQPGNKFERYTGIHPSDRNLLFRGLRWRMARSGLASFMIVGSYFFAVDHLASNLT* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0805 458 ProSiteProfiles Solute carrier (Solcar) repeat profile. 86 172 IPR018108 -
Amo20g0805 458 Pfam Mitochondrial carrier protein 88 174 IPR018108 -
Amo20g0805 458 PANTHER CARRIER PROTEIN 80 454 - -
Amo20g0805 458 Gene3D Mitochondrial carrier domain 88 456 IPR023395 -
Amo20g0805 458 SUPERFAMILY Mitochondrial carrier 88 443 IPR023395 -
Amo20g0805 458 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 80 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0805 Amo-Chr20 11873013 11878376 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0805 107 336 Antiporters AT1G79900 24.621 4.89e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0805 - - ahf:112734472 709.138