Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0786 ACCCACTCGTGGAGCACCCCCCCTTCTTCCCCCGACCCCCATTCATTCCTGATTCATCTCACGCGCCACCGCCGTCGCCTGGTCCTCAGCCCCAGTAACCCTCCATCGTCGCTTGGTTCCCTGCCCAGTAGCCCTCCATCTCCATCGTCTTCATCTTCTCAACACCAGCAGGCAGTAGCCTTCCATCTTCGCGCGGTCATCAACACCATCTCATCGTCTTCATCGTCGCGCGGTCCTCAACAGTCAACACCAGAAGCCTTCCATCGACCCCAGACACGTCCTCATGCAACTGTTGAAGTGGAAATATTAGAAGATATGCAGYTTGTGCATTTTGATTTCAATAGATTTTGA 351 0.5385 THSWSTPPSSPDPHSFLIHLTRHRRRLVLSPSNPPSSLGSLPSSPPSPSSSSSQHQQAVAFHLRAVINTISSSSSSRGPQQSTPEAFHRPQTRPHATVEVEILEDMQXVHFDFNRF* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0786 116 MobiDBLite consensus disorder prediction 26 100 - -
Amo20g0786 116 SUPERFAMILY E2F-DP heterodimerization region 91 114 IPR037241 -
Amo20g0786 116 MobiDBLite consensus disorder prediction 30 59 - -
Amo20g0786 116 MobiDBLite consensus disorder prediction 66 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0786 Amo-Chr20 11353419 11355146 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0786 51 114 E2F-DP Transcription Factor Family AT5G02470 38.889 8.93e-08 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0786 K04683 - aip:107612328 103.99