Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0779 ATGGTTGATTTGATCGGAGAGTCATCGCATAACCAAATAGAGAATGTTTCAGCTGAGGAAATRGACGAATTGTTAGTTGATAGTGATGGCAATGATGTTGMAGACCTGTTACTGAATAGTATAGGAAGTATCGGTCGGGTTAATTTCGTAGGTTTGAGCGTTGATGCTGCTAAGAAGTATGTATTTTCRGACCTTGATGTTGCGTATGCCTTTTACAATGCATTTGGGAGGGTCAATGGATTTTCAATTAGGAAGTTCAAGGTTGGGCGAAGTGAGATTGATAAGCGCATACTCTGGCAAACATTTGTGTGTTCGAGACAAGGATATCGTATTTTCAGAGGGGTTGATGAAACAAATAGGAAGAGAGCTCCAAAGCCAGAGACTAGTATTAAGGAATTCCTCCATCACTTCCGCCGGTGGATGGGTTTGTTGCGGAATAATGAGGCTGAGGCTGACTATTACACCTCATACGGGTATCCGATAATGCAAACACAGGTGCAAGCATTGGAGCGATCAGGAGCAAGTGTTTATACAAGGGAGGTGTTCTACTTGTTTCGATCATTATTGTTGAAAGCGTCAAGTGTGATAATAGTTGATTGGCGAGAGACTTCATGTAGTGTGAACTATGATGTACGAAAATATTGTGAGTTAACACGAAAATGGGTTGTATCTTATTGGCCTGGTAGCAAATTACCTGAGTCACTGATATTGAAGCGRTGGACCATGAAAGCAAAAGAGGCTCATATAAGGTTGGAGCAGCASGGATCGYTAGTTGGAGATAGAAGTTATGAGAGTAGGATTGCTGCTATGAATGATGAGCTGGAGGGCTTGCCATTTGCTGCTTGCGGAGATTTAGGTGATTTCAAGGATGTTATGGAGTGGGTCAGAAACAAAAAGGCTGAATTATTTGCCAAACATGAAAAGAATAGAGAGGGAAGTTCTAAAAGTGCGGGTGAGAAATTCAAAACACGGACGGATGCTAYTTCAAAAGAAGCTGGGGACAAAAAGAAAAAGCGAAGGATTCGGTGCAGCAGATGTAACGGTRTAGGACACAATCGGCGAAATTGTCGYCGTGGAGATGACCATAATCAAATGGAAAGTGGAGACGGAGGAGGTCCCGAAGATGATGACGATTGGTCTAGTCAAACCAGCGAGGAGGGGATCGAAGAAATGGATTTTGATGTSACCATTGGTAATCAGAAAGGCAAGTATCGTTAG 1218 0.422 MVDLIGESSHNQIENVSAEEXDELLVDSDGNDVXDLLLNSIGSIGRVNFVGLSVDAAKKYVFSDLDVAYAFYNAFGRVNGFSIRKFKVGRSEIDKRILWQTFVCSRQGYRIFRGVDETNRKRAPKPETSIKEFLHHFRRWMGLLRNNEAEADYYTSYGYPIMQTQVQALERSGASVYTREVFYLFRSLLLKASSVIIVDWRETSCSVNYDVRKYCELTRKWVVSYWPGSKLPESLILKRWTMKAKEAHIRLEQXGSLVGDRSYESRIAAMNDELEGLPFAACGDLGDFKDVMEWVRNKKAELFAKHEKNREGSSKSAGEKFKTRTDAXSKEAGDKKKKRRIRCSRCNGXGHNRRNCRRGDDHNQMESGDGGGPEDDDDWSSQTSEEGIEEMDFDVTIGNQKGKYR* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0779 405 MobiDBLite consensus disorder prediction 306 336 - -
Amo20g0779 405 MobiDBLite consensus disorder prediction 351 405 - -
Amo20g0779 405 MobiDBLite consensus disorder prediction 353 369 - -
Amo20g0779 405 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 53 111 - -
Amo20g0779 405 MobiDBLite consensus disorder prediction 370 392 - -
Amo20g0779 405 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 53 111 - -
Amo20g0779 405 MobiDBLite consensus disorder prediction 306 334 - -
Amo20g0779 405 Pfam FAR1 DNA-binding domain 71 122 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0779 Amo-Chr20 11261816 11264312 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo20g0779 FAR1 6.2e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0779 - - ahf:112764947 514.612