Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0701 CTGCCACTGGAGGGGAGCCTGGCTGTCCTCGTCACTGCCAGCTCCGTCGTCGTCGTCACCAATGGAGCTGCACAAAGACGTCATCGCCGTTGTCACCATCGATGCTTCTTCTTGTCATTTGTGGGTTGTCACCTCTTCTACTTCTGTTGCCATGCCATCATCTGCCCCTCTGGACTCGCTGCTTTTGAATCGTGTCCTATCACTCGGATATGCTGCAAGAAGCTATCAGAAAGTGACATTGATGAGAAGAAGCACAAACCCTCCACCAGCAAAACCACTGCCTCTAAATCCAAAGATAGAATGGAAGATTACAATTTTGCTATGAAAAGGATGACGAGGAATCCTTATGAGTATCACCACGATCTGGGTATGAATTACACACTTATAATTGACAATCACATTGTGGGATCCCAACCACAGAAACCTGAAGACATCGATCACCTCAAGAAGGAAGAGGGTGTGACATACATTCTGAATTTGCAGCAAGATAAGGATGTAGAATATTGGGGAATAGACTTGAAGTCGATAACAAGGAGGTGCCACGAACTCGATGTTCGACATATGAGGAGGCCGGCAATAGACTTTGATCCAAACTCCTTGCAAAATATTCTACCTAAAGCATCTTATCATTGGAATGGGCAATCTCATAGGGAAAAGAAAGAGTTTACGTGCATTGTACTGCTGGACTTGGGAGAGCACCAGGGGTGA 708 0.459 LPLEGSLAVLVTASSVVVVTNGAAQRRHRRCHHRCFFLSFVGCHLFYFCCHAIICPSGLAAFESCPITRICCKKLSESDIDEKKHKPSTSKTTASKSKDRMEDYNFAMKRMTRNPYEYHHDLGMNYTLIIDNHIVGSQPQKPEDIDHLKKEEGVTYILNLQQDKDVEYWGIDLKSITRRCHELDVRHMRRPAIDFDPNSLQNILPKASYHWNGQSHREKKEFTCIVLLDLGEHQG* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0701 235 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 71 209 - -
Amo20g0701 235 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF2, CHLOROPLASTIC 71 209 - -
Amo20g0701 235 Gene3D Protein tyrosine phosphatase superfamily 108 222 IPR029021 -
Amo20g0701 235 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 122 206 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0701 Amo-Chr20 9892003 9893257 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0701 87 211 Protein tyrosine phosphatase (PTP) family AT3G10940 72.441 4.90e-61 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0701 - - aip:110271941 255.758