Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0681 ATGTCCCCGTTCTCTCGCAAGGACAATCACGCCGAGCCTTTCATTTACAAAGAAACTGCCATCGCGGTGCAAGGCTTCCGCGAGAGAGCATCGTCGATGGCCTTTTCAATCCCGAAAGGAGGATCGAATAGCACATTGATCAATTCAACGGAAGGTAACGAAAAATTGAGTGTGGGTGATGTTGTTACTCAAGAGGGGTCTAAGTTGCCGGATCATAGTGGGATATGTGAAGAGGAAATCCCAATCATAGGAATGTGTTTTGATTCGTTGCCTCTGGCACAGAAATTTTATGCAAATTATGCAAAGAAAGTTGGGTTCGTAACTAAAGTCAGGAACACGAATTTCGACAAGACGAAGAAGAAATCAAAGATACCCATTAATCAAGCTATTCACTGCACCCGAGAAAGTTATCGGGAGTCTTGGGTGAAGGCAGCAACTCGGGCAAACAGAATAATAGCCACCAGATGTAGAACAAGGATGTATGTCATGTTGGACAGGGAGAAGGAAAGTTGGATTGTGTCTAGATTAAAATTGAGGTATTCCCACCCCTGTTCGACTAAGAAAGCGGTCCACTATCATGAGTACAGAGAGTTGACCATGCATGCTAAGTGCGTCATTACAGACAACGACGAGGCTGGCATAAGACCCAACAAGACGTATCTAGCACCGGCTAACGAGGTTGGTGGGTCTTCAAACCTGAGTTTTTCAGAAAAAGATGTCAGAAATTACATCACAAGCAAACTCCGATGTGCTGACGAGAATGCGGACTTTAAGGAGATGATGAATTATTTCGTTTAA 798 0.4411 MSPFSRKDNHAEPFIYKETAIAVQGFRERASSMAFSIPKGGSNSTLINSTEGNEKLSVGDVVTQEGSKLPDHSGICEEEIPIIGMCFDSLPLAQKFYANYAKKVGFVTKVRNTNFDKTKKKSKIPINQAIHCTRESYRESWVKAATRANRIIATRCRTRMYVMLDREKESWIVSRLKLRYSHPCSTKKAVHYHEYRELTMHAKCVITDNDEAGIRPNKTYLAPANEVGGSSNLSFSEKDVRNYITSKLRCADENADFKEMMNYFV* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0681 265 Pfam FAR1 DNA-binding domain 95 184 IPR004330 -
Amo20g0681 265 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 61 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0681 Amo-Chr20 9309362 9310588 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo20g0681 FAR1 2.2e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0681 - - adu:107478475 340.117