Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0665 ATGGCAACAGTCAACTTGGAAGATGTGTTGTACACACGGAGTGATAACAGTGTTGATTACGGAGATGTTGCTTCTTTGACCGATGACGACATATTAAGAAAGGTATTTCCAAGCGAAGAAGATGCATACGATTTCTATCAAAAGTTGGAAAGATATAGGAAACATTACAATCGGGTGGATAGGAGGAAGCCCCATAAGCTAGAGACAAGGACCAACTGTGAGGCGAGGATATGCATATACCTTGACAGGAGCAATAACATGTGGAGGGTGAAGAAGGTTATCACGAAGCACAACCATGCGCTCACACATTAG 312 0.4295 MATVNLEDVLYTRSDNSVDYGDVASLTDDDILRKVFPSEEDAYDFYQKLERYRKHYNRVDRRKPHKLETRTNCEARICIYLDRSNNMWRVKKVITKHNHALTH* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0665 103 Pfam FAR1 DNA-binding domain 54 102 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0665 Amo-Chr20 8992253 8992660 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo20g0665 FAR1 1.2e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0665 - K17604 aip:107620865 125.946