Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0647 ATGGCTACCACCATCATCACCACACCCTCAAGAGATAATAATAATGAACCTGACTACGACAGCAGCTCCTCCTCCGTCACCACCACCACCACCCTCCCTGAATCCACCCGCAGCTGGATGAGCAACCTCAGCTTCAGCAGCCTCCGCCGCCAGAGCTCTGTCTCTGTTTTCTCCTCGTCCTCCGCCATCACAGACACCCCTTTGTTTCTGACTTCTTCTTCTCTCCAAAGCAAGCCGCACAAGGCGAACCAAGTTGCATGGGAGGCCATGCAGCGGCTCCTCAGCCACCACGGGCGCGTGGGGCTCGACCACTTCCGGTTGCTGAGGCGGCTGGGGAGCGGCGACATAGGGAACGTGTACCTTTGCCAGATAAGGAACCCGGTGGTGGGGCTTCCGCAGTGCTTCTACGCCATGAAGGTTGTGGACAGAGAAGCACTTGCCATAAGGAAGAAGCTTCATAGAGCGGAGATGGAGAAGGAGATTCTTGGAATGCTTGATCACCCTTTCTTGCCAACTTTGTACACTCAGTTTGAAGCTTCTCACTACTCTTGCTTGCTCATGGAGTTCTGCCCCGGCGGCGATTTATACGCCGCTCGACAACGCCAGCCCGGCAAGCGCTTCTCCATTGCTTCCGCTAAATTCTATGGAGCGGAGACACTTTTGGCGGTAGAATATCTTCACATGATGGGGATAGTGTACAGGGATTTGAAGCCGGAGAACGTTCTGGTGAGGGAAGACGGCCACATAATGCTATCGGATTTCGATCTCTCTCTCAAATGCGACGTCGTTCCCAAGCTCCTAAGGACAAAAACCACCACCAGATTGGAACGCACCATTAAGTCCACAAAGACCAGATCCTGCGCCACCGCACCCATCCAGCCAGTACTCTCATGCTTCTCACTATCTTCATCAAGAAACAAGAAACGTTCCCCGACCGTTACAACCGTCATAACAGAAAACGCTAACCAAGTTGAAGAACTCGATCCAGAGCTCGTAGCGGAGCCAATAGAAGCAAGGTCGAAATCGTTCGTGGGAACGCACGAGTATTTGGCGCCGGAAGTGATCTTAGGTCAAGGCCATGGCAGCGCCGTGGATTGGTGGACTTTCGGAGTGTTCTTGTATGAGATGTTGTACGGAAGAACGCCGTTCAAAGGCGAGAATAATGAGAAGACGCTGTTGAATATTCTCAAGATGCCATTGGTTTTTCCAAGGATTGCGGTTACTAGTAGCAAGGAGTATGAGGAGATGGTGAAGGTTCAAGATCTTATAAGCAAGCTTTTGGTCAAGAATCCAAACAAGAGGATTGGCAGTTGCATGGGTTCTCTTGAGATTAAGAGGCATGACTTCTTTAAGCCTCTTAATTGGGCTTTGATTAGGTCTATTAAGCCACCCGAGGTGCCTAATCATATCAATAATAACATCCTTAGGAGTAGGGTTTTCATGCCTAGTAGATTAACCAAGAAAGAAAGAGATCAACCCTATAAGCTTAGTCATCATCATTTTCAATACTTCTAA 1515 0.4983 MATTIITTPSRDNNNEPDYDSSSSSVTTTTTLPESTRSWMSNLSFSSLRRQSSVSVFSSSSAITDTPLFLTSSSLQSKPHKANQVAWEAMQRLLSHHGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPVVGLPQCFYAMKVVDREALAIRKKLHRAEMEKEILGMLDHPFLPTLYTQFEASHYSCLLMEFCPGGDLYAARQRQPGKRFSIASAKFYGAETLLAVEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRTKTTTRLERTIKSTKTRSCATAPIQPVLSCFSLSSSRNKKRSPTVTTVITENANQVEELDPELVAEPIEARSKSFVGTHEYLAPEVILGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNEKTLLNILKMPLVFPRIAVTSSKEYEEMVKVQDLISKLLVKNPNKRIGSCMGSLEIKRHDFFKPLNWALIRSIKPPEVPNHINNNILRSRVFMPSRLTKKERDQPYKLSHHHFQYF* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0647 504 ProSiteProfiles Protein kinase domain profile. 105 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g0647 504 SMART serkin_6 105 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g0647 504 PANTHER FLIPPASE KINASE 1-RELATED 13 504 - -
Amo20g0647 504 CDD STKc_phototropin_like 103 467 - -
Amo20g0647 504 PANTHER PROTEIN KINASE PINOID 2 13 504 - -
Amo20g0647 504 MobiDBLite consensus disorder prediction 1 33 - -
Amo20g0647 504 SUPERFAMILY Protein kinase-like (PK-like) 79 482 IPR011009 -
Amo20g0647 504 Gene3D Phosphorylase Kinase; domain 1 103 189 - -
Amo20g0647 504 Pfam Protein kinase domain 106 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g0647 504 Pfam Protein kinase domain 340 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g0647 504 Gene3D Transferase(Phosphotransferase) domain 1 190 259 - -
Amo20g0647 504 Gene3D Transferase(Phosphotransferase) domain 1 338 468 - -
Amo20g0647 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0647 Amo-Chr20 8534081 8535891 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0647 14 504 AGC Kinase Gene Family AT2G26700 58.627 0.0 591
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Amo20g0647 Pkinase 1.6e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0647 K08286 - gmx:100777988 726.087