Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo20g0647 | ATGGCTACCACCATCATCACCACACCCTCAAGAGATAATAATAATGAACCTGACTACGACAGCAGCTCCTCCTCCGTCACCACCACCACCACCCTCCCTGAATCCACCCGCAGCTGGATGAGCAACCTCAGCTTCAGCAGCCTCCGCCGCCAGAGCTCTGTCTCTGTTTTCTCCTCGTCCTCCGCCATCACAGACACCCCTTTGTTTCTGACTTCTTCTTCTCTCCAAAGCAAGCCGCACAAGGCGAACCAAGTTGCATGGGAGGCCATGCAGCGGCTCCTCAGCCACCACGGGCGCGTGGGGCTCGACCACTTCCGGTTGCTGAGGCGGCTGGGGAGCGGCGACATAGGGAACGTGTACCTTTGCCAGATAAGGAACCCGGTGGTGGGGCTTCCGCAGTGCTTCTACGCCATGAAGGTTGTGGACAGAGAAGCACTTGCCATAAGGAAGAAGCTTCATAGAGCGGAGATGGAGAAGGAGATTCTTGGAATGCTTGATCACCCTTTCTTGCCAACTTTGTACACTCAGTTTGAAGCTTCTCACTACTCTTGCTTGCTCATGGAGTTCTGCCCCGGCGGCGATTTATACGCCGCTCGACAACGCCAGCCCGGCAAGCGCTTCTCCATTGCTTCCGCTAAATTCTATGGAGCGGAGACACTTTTGGCGGTAGAATATCTTCACATGATGGGGATAGTGTACAGGGATTTGAAGCCGGAGAACGTTCTGGTGAGGGAAGACGGCCACATAATGCTATCGGATTTCGATCTCTCTCTCAAATGCGACGTCGTTCCCAAGCTCCTAAGGACAAAAACCACCACCAGATTGGAACGCACCATTAAGTCCACAAAGACCAGATCCTGCGCCACCGCACCCATCCAGCCAGTACTCTCATGCTTCTCACTATCTTCATCAAGAAACAAGAAACGTTCCCCGACCGTTACAACCGTCATAACAGAAAACGCTAACCAAGTTGAAGAACTCGATCCAGAGCTCGTAGCGGAGCCAATAGAAGCAAGGTCGAAATCGTTCGTGGGAACGCACGAGTATTTGGCGCCGGAAGTGATCTTAGGTCAAGGCCATGGCAGCGCCGTGGATTGGTGGACTTTCGGAGTGTTCTTGTATGAGATGTTGTACGGAAGAACGCCGTTCAAAGGCGAGAATAATGAGAAGACGCTGTTGAATATTCTCAAGATGCCATTGGTTTTTCCAAGGATTGCGGTTACTAGTAGCAAGGAGTATGAGGAGATGGTGAAGGTTCAAGATCTTATAAGCAAGCTTTTGGTCAAGAATCCAAACAAGAGGATTGGCAGTTGCATGGGTTCTCTTGAGATTAAGAGGCATGACTTCTTTAAGCCTCTTAATTGGGCTTTGATTAGGTCTATTAAGCCACCCGAGGTGCCTAATCATATCAATAATAACATCCTTAGGAGTAGGGTTTTCATGCCTAGTAGATTAACCAAGAAAGAAAGAGATCAACCCTATAAGCTTAGTCATCATCATTTTCAATACTTCTAA | 1515 | 0.4983 | MATTIITTPSRDNNNEPDYDSSSSSVTTTTTLPESTRSWMSNLSFSSLRRQSSVSVFSSSSAITDTPLFLTSSSLQSKPHKANQVAWEAMQRLLSHHGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPVVGLPQCFYAMKVVDREALAIRKKLHRAEMEKEILGMLDHPFLPTLYTQFEASHYSCLLMEFCPGGDLYAARQRQPGKRFSIASAKFYGAETLLAVEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRTKTTTRLERTIKSTKTRSCATAPIQPVLSCFSLSSSRNKKRSPTVTTVITENANQVEELDPELVAEPIEARSKSFVGTHEYLAPEVILGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNEKTLLNILKMPLVFPRIAVTSSKEYEEMVKVQDLISKLLVKNPNKRIGSCMGSLEIKRHDFFKPLNWALIRSIKPPEVPNHINNNILRSRVFMPSRLTKKERDQPYKLSHHHFQYF* | 505 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo20g0647 | 504 | ProSiteProfiles | Protein kinase domain profile. | 105 | 450 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo20g0647 | 504 | SMART | serkin_6 | 105 | 450 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo20g0647 | 504 | PANTHER | FLIPPASE KINASE 1-RELATED | 13 | 504 | - | - | |
Amo20g0647 | 504 | CDD | STKc_phototropin_like | 103 | 467 | - | - | |
Amo20g0647 | 504 | PANTHER | PROTEIN KINASE PINOID 2 | 13 | 504 | - | - | |
Amo20g0647 | 504 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Amo20g0647 | 504 | SUPERFAMILY | Protein kinase-like (PK-like) | 79 | 482 | IPR011009 | - | |
Amo20g0647 | 504 | Gene3D | Phosphorylase Kinase; domain 1 | 103 | 189 | - | - | |
Amo20g0647 | 504 | Pfam | Protein kinase domain | 106 | 261 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo20g0647 | 504 | Pfam | Protein kinase domain | 340 | 450 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo20g0647 | 504 | Gene3D | Transferase(Phosphotransferase) domain 1 | 190 | 259 | - | - | |
Amo20g0647 | 504 | Gene3D | Transferase(Phosphotransferase) domain 1 | 338 | 468 | - | - | |
Amo20g0647 | 504 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 231 | 243 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo20g0647 | Amo-Chr20 | 8534081 | 8535891 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo20g0647 | 14 | 504 | AGC Kinase Gene Family | AT2G26700 | 58.627 | 0.0 | 591 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | AGC_RSK-2 | Amo20g0647 | Pkinase | 1.6e-30 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo20g0647 | K08286 | - | gmx:100777988 | 726.087 |