Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0641 ATGGAGGACAGAAAAGTCAACACAATAGCCATGGTATCAGTGGTAACACTGATCATAGTGATCATGGTTGCTCGCATCGCGTTGAAGCTCTCAAAGGCCTTCTTCCTCATATGCGGTGCTGACGTGGCCGTGATCGTGGCCATCTTCTCCTTCGTCCTAATCAGAAACCGTTACAACAAACGGAGGAAGCAGTTAGAGTCACGGTTCAAGTCAGAAGGGAGAGAGCTCCGAATAGAGTACAGCTTCTTGCGCAAAGTGGCGGGGGTCCCAACTAAATTCCGTTACACGGAGCTCGAGGAAGCAACCGACGGTTTTCAAGCACTTCTTGGAAAAGGCTCCTCCGCAACGGTCTTCAAAGGGATCCTCAGCGACGGAACTTCGGTTGCCGTGAAGCGAATCGACGACGGAGCCGAAAGAGGCGAAAGAGAGTTCAGATCAGAGGTTGCAGCCATTGCTAGCGTTCAACACGTCAACCTCGTGCGTTTGTATGGTTACTGCAATGCTCCTTCTTCACCAAGGTACCTTGTTTATGAGTACATATCAAACGGTTCGTTAGATTCTTGGATTTTTCCGAAAAAGGAAAGTGACAATAGTAGAAGAAGAGTTGGAGGGTGTTTGCCTTGGAGCTTAAGGTACAAAGTGGCAATCGATGTGGCGAAAGGACTTAGCTACCTCCACCATGATTGCAGGGCAAGGATTCTTCACCTTGATGTGAAGCCAGAGAATATACTCTTAGATGAGGGTTACAGAGCAGTTGTGGCGGATTTCGGGCTTTCGAAGCTGGTTGGAAAGGATGTTAGTCAAGTTATGACAACACTGAGAGGAACAAGAGGGTATTTAGCGCCTGAGTGGCTTTTGGAAAGAGGGGTTTCGGAGAAGACTGATATCTATAGCTATGGGATGGTTTTGTTGGAGATGATTGGAGGGAGAAGGAACGTTTGTAAGGTGGAAGATCCAAAGGACAAGAGTAAGAAGAAGTTGCAGTTTTTTCCAAAGATTGTGAATGAGAAAGTGAGGGAAGGGAAGTTGATGGAGATTGTGGATGAGAGATTATTGGTGGTGGGGGCTGGTGGTGTTGAGGAGAGTGAGGTGGTTAGGTTGGTGAATGTTGCATTGTGGTGCATACAAGAGAGGCCACGAATGAGGCCTAGTATGGCACAAGTTGCTGATATGCTTGAAGGGCGTGTCACAGTTGAGGAGCCACCAGATAGTAGAATGGTGCTTGTTGATTTCTTATCTCAAGATGAAGACAACCCTGCAATTCTGGATCACAATCAGAATAACATGGCAAGGTTATTGACATCTATGTCTACTCATGAAGATTGTTCATCAACCTACTCAATGGGAACTACCACTATTCTATCTGGTAGATAG 1374 0.4658 MEDRKVNTIAMVSVVTLIIVIMVARIALKLSKAFFLICGADVAVIVAIFSFVLIRNRYNKRRKQLESRFKSEGRELRIEYSFLRKVAGVPTKFRYTELEEATDGFQALLGKGSSATVFKGILSDGTSVAVKRIDDGAERGEREFRSEVAAIASVQHVNLVRLYGYCNAPSSPRYLVYEYISNGSLDSWIFPKKESDNSRRRVGGCLPWSLRYKVAIDVAKGLSYLHHDCRARILHLDVKPENILLDEGYRAVVADFGLSKLVGKDVSQVMTTLRGTRGYLAPEWLLERGVSEKTDIYSYGMVLLEMIGGRRNVCKVEDPKDKSKKKLQFFPKIVNEKVREGKLMEIVDERLLVVGAGGVEESEVVRLVNVALWCIQERPRMRPSMAQVADMLEGRVTVEEPPDSRMVLVDFLSQDEDNPAILDHNQNNMARLLTSMSTHEDCSSTYSMGTTTILSGR* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0641 457 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Amo20g0641 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Amo20g0641 457 SMART serkin_6 103 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g0641 457 SUPERFAMILY Protein kinase-like (PK-like) 85 393 IPR011009 -
Amo20g0641 457 PANTHER RECEPTOR-LIKE KINASE 1 457 - -
Amo20g0641 457 Gene3D Phosphorylase Kinase; domain 1 64 179 - -
Amo20g0641 457 Coils Coil 55 75 - -
Amo20g0641 457 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 457 - -
Amo20g0641 457 ProSiteProfiles Protein kinase domain profile. 103 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g0641 457 Gene3D Transferase(Phosphotransferase) domain 1 180 407 - -
Amo20g0641 457 Pfam Protein kinase domain 108 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0641 Amo-Chr20 8489340 8490900 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0641 1 404 Receptor kinase-like Gene Family AT5G20050 66.256 0.0 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Amo20g0641 Pkinase 7.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0641 - - gmx:100779485 686.026