Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0616 ATGAGTTCAGAAGATTGCCTTGGTTGGGCTGCAAGAGATGCATCTGGACATCTCTCCCCATACAAATTCAATCGCAGGGCTGTAGYAGATGATGATGTTTATGTTAAGATCACACACTGTGGTATTTGTTATGCTGATATCGCTTGGACAAGGAATAAARTTGGTGACTCCAAGTACCCTGTTGTGCCAGGACATGAGATTGCAGGCATTGTGAGCAAGGTTGGTTCCAATGTCAAGCGTTTCAATGTTGGTGACCATGTTGGAGTGGGGACTTATGTCAACTCATGCCGCGACTGCGAGTATTGCGAAGATGGACTAGAACATCAGTGCAGTAAGGGAGTTTTTACCTTTAATGGGGTTGATTCTGATGGTACAATCACAAAGGGAGGATACTCCAATTTCATAGTAGTCCATGAAAGGTATTGTTTTAAGATACCAAAAAGTTATCCATTGGCTTCAGCAGCACCTTTGCTGTGTGCCGGAATCACTGTTTATTCTCCGATGATTCGTTACAAGATGAATGAGCAGCCGGGAAAATCTCTAGGAGTGATTGGCCTTGGTGGACTTGGTCACATGGCTGTTAAATTTGGAAAGGCTTTTGGTTTGAATGTAACAGTTTTCAGCACCAGCATATCAAAGAAAGATGAGGCCCTCAATTTGCTTGGTGCAGATAACTTTGTGATTTCCTCTGATCAAGGCCAAATGAAAGGATTAACAAAGACATTAGACTTTATAATTGACACAGCATCTGGTGATCATCCTTATGATCCTTACATGGCACTTCTGAAAACATTTGGTATCTTAGTTGCAGTTGGGGCTGGAACTGAAATCAAGTTCAGCCCTAGAAGCCTATTTTTTGGATTGAGGAGTATTTCTGGAAGTATTGTAGGTGGTACAAAAGATATACAGGATATGATTGATTTATGTGTTGAAAAGGAGATTTATCCAAAGATTGAAGTAATTCCTATTGAGTATGCTAATGAAGCTATTGAAAGGGTCATAAAAAGTGATGTCAAGTATCGGTTTGTGATTGATATTGAAAACTCCCTAAAGTAA 1056 0.4025 MSSEDCLGWAARDASGHLSPYKFNRRAVXDDDVYVKITHCGICYADIAWTRNKXGDSKYPVVPGHEIAGIVSKVGSNVKRFNVGDHVGVGTYVNSCRDCEYCEDGLEHQCSKGVFTFNGVDSDGTITKGGYSNFIVVHERYCFKIPKSYPLASAAPLLCAGITVYSPMIRYKMNEQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVFSTSISKKDEALNLLGADNFVISSDQGQMKGLTKTLDFIIDTASGDHPYDPYMALLKTFGILVAVGAGTEIKFSPRSLFFGLRSISGSIVGGTKDIQDMIDLCVEKEIYPKIEVIPIEYANEAIERVIKSDVKYRFVIDIENSLK* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0616 351 Pfam Alcohol dehydrogenase GroES-like domain 31 145 IPR013154 -
Amo20g0616 351 Pfam Zinc-binding dehydrogenase 188 309 IPR013149 -
Amo20g0616 351 PANTHER - 5 350 - -
Amo20g0616 351 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 181 208 IPR029752 -
Amo20g0616 351 SUPERFAMILY GroES-like 8 193 IPR011032 -
Amo20g0616 351 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 150 314 IPR036291 -
Amo20g0616 351 CDD CAD1 8 345 - -
Amo20g0616 351 SMART PKS_ER_names_mod 16 344 IPR020843 GO:0016491
Amo20g0616 351 Gene3D - 9 346 - -
Amo20g0616 351 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 64 78 IPR002328 GO:0008270|GO:0016491
Amo20g0616 351 Gene3D - 160 316 - -
Amo20g0616 351 PANTHER ALDEHYDE REDUCTASE 5 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0616 Amo-Chr20 7747923 7749820 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0616 5 351 Monolignol Biosynthesis Gene Families AT1G72680 71.758 0.0 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0616 K00083 - gmx:100807617 565.844