Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0614 ATGAGTTCAGAAGATTGCCTTGGTTGGGCTGCAAGAGATGCATCTGGACATCTCTCACCATACAAATTCAATCGCAGGGCTGTAGGAGATGATGATGTTCATGTTAAGATCACACACTGTGGTGTTTGTTATGCTGATATCGTTTGGACAAGGAATAAATTTGGTGACTCCAAGTACCCTGTTGTGCCAGGACATGAGATTGCAGGCGTTGTGAGCAAGGTTGGTTCCAATGTCAAGCGTTTCAATGTTGGTGACCATGTTGGAGTGGGGACTTATGTCAACTCATGCCGCGACTGCGAGTATTGCGACGATAGACTAGAACATCAGTGCAGTAAGGGAGGAGTTTTTACCTTTAATGGGGTTGATTCTGATGGTACAATCACAAAGGGAGGATACTCCAATTTCATAGTAGTCCATGAAAGGTATTGTTTCAAGATACCAAAAAGTTATCCATTGGCTTCAGCAGCACCTTTGCTGTGTGCCGGAATCACTGTTTATTCGCCGATGATTCGCCACAAGATGAATGAGCAGCCGGGAAAATCTCTAGGAGTGATTGGCCTTGGTGGACTTGGTCACATGGCTGTTAAATTTGGAAAGGCTTTTGGTCTGAATGTAACAGTTTTCAGCACCAGCATATCTAAGAAAGATGAAGCCCTCAATCTGCTTGGTGCAGATAACTTTGTAATTTCATCTGATGAAGACCAAATGAAAAGATTAACAAAGACACTAGATTTTATAATTGACACAGCATCTGGTGATCATCCTTTTGATCCTTACTTGGCACTTCTGAAAACACTTGGTATTCTAGTAGTAGTTGGGGCTGCAAATGAAATCAAGTTCAGCCCTGTAAGCCTATTCTTCGGATTGAAGACTATTTCTGGAAGTTCTGTGGGAGGTACAAAAGATATACAAGAGATGATTGATTTATGTGCTGAAAAAAACATTTACCCAAAGATTGAAGTAATTCCTATTGAGTATGCTAATGAAGCTATTGAAAGGGTCATAAAAAATGATGTCAAGTATCGGTTTGTGATTGATATTGAAAATTCCCTGAAGTAA 1059 0.407 MSSEDCLGWAARDASGHLSPYKFNRRAVGDDDVHVKITHCGVCYADIVWTRNKFGDSKYPVVPGHEIAGVVSKVGSNVKRFNVGDHVGVGTYVNSCRDCEYCDDRLEHQCSKGGVFTFNGVDSDGTITKGGYSNFIVVHERYCFKIPKSYPLASAAPLLCAGITVYSPMIRHKMNEQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVFSTSISKKDEALNLLGADNFVISSDEDQMKRLTKTLDFIIDTASGDHPFDPYLALLKTLGILVVVGAANEIKFSPVSLFFGLKTISGSSVGGTKDIQEMIDLCAEKNIYPKIEVIPIEYANEAIERVIKNDVKYRFVIDIENSLK* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0614 352 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 182 209 IPR029752 -
Amo20g0614 352 SUPERFAMILY GroES-like 12 173 IPR011032 -
Amo20g0614 352 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 151 315 IPR036291 -
Amo20g0614 352 CDD CAD1 8 346 - -
Amo20g0614 352 Pfam Alcohol dehydrogenase GroES-like domain 31 146 IPR013154 -
Amo20g0614 352 PANTHER ALDEHYDE REDUCTASE 5 351 - -
Amo20g0614 352 Pfam Zinc-binding dehydrogenase 189 311 IPR013149 -
Amo20g0614 352 Gene3D - 9 347 - -
Amo20g0614 352 PANTHER - 5 351 - -
Amo20g0614 352 SMART PKS_ER_names_mod 16 345 IPR020843 GO:0016491
Amo20g0614 352 Gene3D - 161 317 - -
Amo20g0614 352 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 64 78 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0614 Amo-Chr20 7725458 7727823 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0614 5 352 Monolignol Biosynthesis Gene Families AT1G72680 71.839 0.0 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0614 K00083 - vvi:100244482 582.408