Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0591 ATGGATAATCTCTGTTGCTTCAATTCTGTCTCTCAGGTGGTTGGAGGTCGTTCTTCATGTAGCTCCGGCAAGGGTAGGAGCTCTCAGTATGCAGTCAAGTATGGCTTCAGTCTAGTTAAAGGGAAAGCGAATCACCCAATGGAGGACTATCACGTGGCGAAATTTGTCCAGTCGAGAGGGCAAGAGCTAGGACTTTTCGCTATCTATGACGGACACTTGGGAGACACTGTTCCAGCATATCTACAAAAGCATCTGCTTTCTAATATCTTGAAGGAAGCAGACTTCTGGAATGATCCAAGCAGTTCCATCATTAAGGCCTACGAGACAACGGATCAGGCCATTCTTTCTCACAATCCTGATCTGGGACGGGGCGGATCAACTGCAGTGACTGCAATTCTCATAAATAATCAGCAATTGTGGATAGCGAATGTTGGAGATTCACGAGCAGTTCTGTCACGGGGAGGGCAGGCCATACAGATGACGGTAGATCATGAGCCCAATACCGAAAGGGGCATAATCGAGAACAAAGGCGGATTTGTCTCAAACATGCCAGGAGATGTTGCAAGAGTGAACGGGCAGCTTGCAGTKTCTCGGGCATTCGGAGACAGAAACCTCAAATCGCACTTGCGATCTGATCCTGATGTACAACATTGTGACATTGAACAAGATACTGAGCTTTTGATTCTGGCTAGTGATGGTCTTTGGAAGGTAATGGCAAACCAAGAAGCAGTGGATATTGCGAAAARGATCAAAGATCCTCAAAAGGCRGCGAAACAGCTAGCTGCGGAGGCATTGAACAGAGACAGTAAAGATGACATTTCATGCATTGTAGTTCGTTTCAAGTGA 846 0.4622 MDNLCCFNSVSQVVGGRSSCSSGKGRSSQYAVKYGFSLVKGKANHPMEDYHVAKFVQSRGQELGLFAIYDGHLGDTVPAYLQKHLLSNILKEADFWNDPSSSIIKAYETTDQAILSHNPDLGRGGSTAVTAILINNQQLWIANVGDSRAVLSRGGQAIQMTVDHEPNTERGIIENKGGFVSNMPGDVARVNGQLAVSRAFGDRNLKSHLRSDPDVQHCDIEQDTELLILASDGLWKVMANQEAVDIAKXIKDPQKAAKQLAAEALNRDSKDDISCIVVRFK* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0591 281 Pfam Protein phosphatase 2C 42 273 IPR001932 -
Amo20g0591 281 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 1 280 - -
Amo20g0591 281 SMART PP2C_SIG_2 44 280 IPR001932 -
Amo20g0591 281 Gene3D - 28 281 IPR036457 -
Amo20g0591 281 PANTHER PROTEIN PHOSPHATASE 2C 1 280 IPR015655 GO:0004722|GO:0006470
Amo20g0591 281 SUPERFAMILY PP2C-like 27 281 IPR036457 -
Amo20g0591 281 CDD PP2Cc 32 280 IPR001932 -
Amo20g0591 281 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Amo20g0591 281 SMART PP2C_4 25 278 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0591 Amo-Chr20 7444837 7448456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0591 1 281 PP2C-type Phosphatase Gene Family AT1G22280 69.338 1.16e-145 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0591 K17506 - gmx:100801722 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0591 20 7444837 7448456 Amo10g0324 10 3290200 3293881 hybridization
Amo13g5189 13 151810146 151814430 Amo20g0591 20 7444837 7448456 PCT
Amo20g0591 20 7444837 7448456 Amo13g5189 13 151810146 151814430 PCT