Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0570 ATGGACGGTGTTTTCATCAACAAAAGATTCATTATGATTGCCTTATTGTGTATTGTTTCTACCACGGTGCATGGCCAAGGTACCCGTGTAGGGTTCTATGCGACTACATGTCCAAAAGCTGAGTCCATTATCAAGTCCACGGTTCAATCCCATCTTAACTCCGACCCTACTCTAGCTGCTGGCTTACTCAGAATGCACTTCCATGATTGCTTTGTCCAAGGTTGCGATGCTTCTGTCCTCGTTACCGGCTCTGCCACCGAGAAAACAGCATTTGCAAACCTCGAACTTAGAGGATTTGAGGTCATTGACGACGCAAAGACACAACTCGAAGCTGCATGCCCCGGTGTTGTGTCTTGCGCCGATATTCTTGCCCTTGCTGCTCGCGACTCTGTCGTCCTGAGCGGTGGATTGAGTTGGCAAGTGCCTACAGGACGTAAAGATGGTCATGTGTCACAAGCTTCGGATGTTAACAACTTGCCTGCACCTACGGACTCTGTTGATGTTCAAAAACAGAAGTTTGCAGCAAAGGGCCTCAACACACAAGACCTCGTTACCCTTGTTGGAGGACATACGATAGGTACCGCAGCATGCCAATTCTTCAGCAACAGATTGTACAACTTCACCGGAAATGGCCCTGATCCTTCCATTGACCCTTCATTTGTTCCGCAACTACAAGCACTCTGCCCTCAAAACAGTGGCGGTAGCAACCGTGTTCCCTTAGATACCGGAAGCCAACTGAAATTTGATACTTCTTACTATGCTAATTTGAAGAATGGACGTGGAATTCTTGAGTCAGATGAGGAACTATGGAATGATGCTTCCACAAAAATGTTTGTGCAGAGATACTTAGGCCTAAGAGGGGTGCTTGACTTGTCTTTCAGCGTTGAGTTTGGAAAGTCTATGGTTAAGATGGGCAACATTGGAGTCAAGACTGGTGCTGATGGTGAAATTCGCAAGATTTGTTCTGCTTTTAACTAA 978 0.4642 MDGVFINKRFIMIALLCIVSTTVHGQGTRVGFYATTCPKAESIIKSTVQSHLNSDPTLAAGLLRMHFHDCFVQGCDASVLVTGSATEKTAFANLELRGFEVIDDAKTQLEAACPGVVSCADILALAARDSVVLSGGLSWQVPTGRKDGHVSQASDVNNLPAPTDSVDVQKQKFAAKGLNTQDLVTLVGGHTIGTAACQFFSNRLYNFTGNGPDPSIDPSFVPQLQALCPQNSGGSNRVPLDTGSQLKFDTSYYANLKNGRGILESDEELWNDASTKMFVQRYLGLRGVLDLSFSVEFGKSMVKMGNIGVKTGADGEIRKICSAFN* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0570 325 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo20g0570 325 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo20g0570 325 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo20g0570 325 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo20g0570 325 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo20g0570 325 CDD secretory_peroxidase 29 324 IPR033905 GO:0004601|GO:0042744
Amo20g0570 325 Pfam Peroxidase 45 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo20g0570 325 PANTHER PEROXIDASE 15 323 - -
Amo20g0570 325 PANTHER PEROXIDASE 25-RELATED 15 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo20g0570 325 Gene3D Peroxidase, domain 2 160 304 - -
Amo20g0570 325 ProSiteProfiles Plant heme peroxidase family profile. 27 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo20g0570 325 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Amo20g0570 325 Gene3D - 31 325 - -
Amo20g0570 325 SUPERFAMILY Heme-dependent peroxidases 29 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo20g0570 325 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo20g0570 325 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo20g0570 325 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo20g0570 325 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo20g0570 325 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo20g0570 325 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo20g0570 325 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo20g0570 325 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo20g0570 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo20g0570 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0570 Amo-Chr20 7196222 7197963 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0570 11 325 Peroxidase AT5G64120 61.728 5.77e-148 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0570 K00430 - gmx:100820620 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0570 20 7196222 7197963 Amo20g0570 20 7196222 7197963 ECH
Amo20g0570 20 7196222 7197963 Amo10g0342 10 3486130 3487822 hybridization