Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0537 ATGGCAGATACAATTGCTGAATCCGACAACAACCCCAAGTCTTCAAAGGTCTTCAACATGGATCTGGAGAAGCAAGAGGGGGTGGTGGTGGTAACGCCGGAGGAAGTGGAGGTTTTTGACTATGCCAAGAGGGCACAGTGGCTTAGGGCTGCAGTTTTAGGTGCAAACGATGGCTTGCTATCAACAGCATCCCTCATGATGGGCGTTGGAGCCGTCAAACAAGATGTTAAGACCATGATCCTCACCGGAGTCGCCGGTTTGGTGGCCGGAGCTTGCAGCATGGCAATTGGAGAGTTTGTCTCCGTCTATTCCCAGTATGATATCGAGCTTGCGCAGATGAAGAGGGAAGGCAACACGCAAGACAAAAACAAACTTCCTAACCCTTATACTGCGGCCATGGCCTCCGCCGTCGCCTTTTCAGTCGGGGCCTTGGTGCCCCTACTGGCTGCCGCCTTCATAAAAGATTATAAGGTGAGGTTAGCGGTGGTGGTGGCGGTGGTGAGCCTTGCCTTGTTGGTGTTTGGAGGGGTGGGTGCTGTTTTAGGGAAAGCACCATTTGTGAAGTCATCTTTGAGGGTCTTGATCGGAGGATGGTTGGCTATGGCGGTTACTTTTGGGTTAACCAAGTTGGCTGGTCATGTTGGAGTTTGA 651 0.5192 MADTIAESDNNPKSSKVFNMDLEKQEGVVVVTPEEVEVFDYAKRAQWLRAAVLGANDGLLSTASLMMGVGAVKQDVKTMILTGVAGLVAGACSMAIGEFVSVYSQYDIELAQMKREGNTQDKNKLPNPYTAAMASAVAFSVGALVPLLAAAFIKDYKVRLAVVVAVVSLALLVFGGVGAVLGKAPFVKSSLRVLIGGWLAMAVTFGLTKLAGHVGV* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0537 216 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 8 212 IPR008217 GO:0005384|GO:0030026
Amo20g0537 216 Pfam VIT family 113 208 IPR008217 GO:0005384|GO:0030026
Amo20g0537 216 Pfam VIT family 48 121 IPR008217 GO:0005384|GO:0030026
Amo20g0537 216 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 8 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0537 Amo-Chr20 6772597 6773514 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0537 7 216 Nodulin-like Gene Family AT3G43660 68.246 2.04e-98 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0537 K22736 - gmx:100811713 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0537 20 6772597 6773514 Amo20g0537 20 6772597 6773514 ECH