Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0534 GGCATTCCTAGCATAAGATGGTCTGGTGTAGATGGGGAGGATAATGTTCTCGTGATGGATTTGCTTGGGCCTGGTCTTGAGGATCCCTTTGTGTATTGTGGAAGGAAGTTCTCATTGAAGACAGTATTGATGTTGGCTGATCAAATGATGACTAGAATAGAATATGTGCATTCCAAAGATTTTCTACATAGAGATATAAAGCCTGACAACTTTCTCATGGGACTTGGTCGGAAAGCAAACCAGGTAGCTACACGGTTATTGCTTTGTTCAGAGAGAAACATTTTTAGATATGGCAAATTAGAGATGATTTTTCATGGCCAAGATTTTACCACTAACCATATAGCACATCTTCAGATACTGAAGTGTTTATGA 372 0.3925 GIPSIRWSGVDGEDNVLVMDLLGPGLEDPFVYCGRKFSLKTVLMLADQMMTRIEYVHSKDFLHRDIKPDNFLMGLGRKANQVATRLLLCSERNIFRYGKLEMIFHGQDFTTNHIAHLQILKCL* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0534 123 Pfam Protein kinase domain 16 73 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g0534 123 ProSiteProfiles Protein kinase domain profile. 1 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g0534 123 PANTHER CASEIN KINASE-RELATED 1 82 - -
Amo20g0534 123 ProSitePatterns Serine/Threonine protein kinases active-site signature. 61 73 IPR008271 GO:0004672|GO:0006468
Amo20g0534 123 PANTHER CASEIN KINASE 1-LIKE PROTEIN 3-RELATED 1 82 - -
Amo20g0534 123 SUPERFAMILY Protein kinase-like (PK-like) 1 76 IPR011009 -
Amo20g0534 123 Gene3D Transferase(Phosphotransferase) domain 1 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0534 Amo-Chr20 6755200 6755959 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Amo20g0534 Pkinase 9.7e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0534 K08960 - aip:107639890 162.155