Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0532 ATGGCTTCATTTGTACCCTCTGATATGGTTTCAACCAACCATAACAATGGTGGAGTTTTAGTTGTTGCAATCAACAACAAAGAGGAGAAGGAACAACAACAACAAATAATGAGTGAAGAAAAAGAAGAAGAAGAAGAAAAGAAGATTGACTACTCGCAAAGAGCACAGTGGCTTCGTGCCGGTGTAATGGGAGCCACGGACGGATTAGTATCAGTGGCTTCGTTAATGATGGGAGTGGGAGCGGTTCGAACCGACGCAAAAGCTATGCTTCTTGCTGGTTTTGCAGGATCAGTTGCAGGAGGTTGTAGCATGGCAATAGGTGAGTTTGTTTCTGTGTACACACAGTATGAAGTCGAAGTTGCTCAAATCAAGAACAAAACAATTTGTGAAGACGTGCAAATGGTTAAGAAAGCGTTACCTAATCCATTGCAAGCTGCATTGGCATCTGCATCGTGTTATTGTTTAGGTGCGGTTCCTCCTTTGGTGGGAGCAGCGTTTATTAGAGACTACCGTACAAGGATTATGGTGGTTTTGGCGGTGGCTACTCTCTCTTTGTTTGTGTTTGGTTGGATTGGGTCTGTGCTTGGAAACACACCAATGCTTAGGTCTTGTGCTAGGCTTCTTCTTGGTGGATGGATGGCTATGGCTATTACTTTTGCCTTAACCAAATTATTTGCTTTTACCGGTTTGCAATTCTGA 699 0.4335 MASFVPSDMVSTNHNNGGVLVVAINNKEEKEQQQQIMSEEKEEEEEKKIDYSQRAQWLRAGVMGATDGLVSVASLMMGVGAVRTDAKAMLLAGFAGSVAGGCSMAIGEFVSVYTQYEVEVAQIKNKTICEDVQMVKKALPNPLQAALASASCYCLGAVPPLVGAAFIRDYRTRIMVVLAVATLSLFVFGWIGSVLGNTPMLRSCARLLLGGWMAMAITFALTKLFAFTGLQF* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0532 232 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 26 226 IPR008217 GO:0005384|GO:0030026
Amo20g0532 232 Pfam VIT family 136 222 IPR008217 GO:0005384|GO:0030026
Amo20g0532 232 Pfam VIT family 58 125 IPR008217 GO:0005384|GO:0030026
Amo20g0532 232 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 26 226 - -
Amo20g0532 232 Coils Coil 23 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0532 Amo-Chr20 6746116 6746814 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0532 31 230 Nodulin-like Gene Family AT3G43660 55.500 2.08e-79 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0532 K22736 - han:110916955 238.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0532 20 6746116 6746814 Amo20g0532 20 6746116 6746814 ECH