Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0531 ATGGGGGTGGTTGTATGGGAGTTGTTGTGGTTGTTAATGGTGTTGACAAGTTGTTGTGAGGGTCAGTTTATTCTTCAAGTGGGTTTCTACAGAAACACGTGTCCTGAAGCTGAGTCCATTGTCCATGGCGTAGTGAGAGACGCCGTTGCCTCTGACCCCAACATGGGGGCGGCCTTGCTCAGGCTTCACTTCCATGACTGCTTTGTTGAGGGATGCGACGCTTCCATTCTCATCGACGTGTCATCACAGCCGGAGAAGCTTGCATTTGCTCATCAAGGCCTCAGAGGCTTTGAGGTCATTCAGAGAGCCAAGGCTCAATTGGAAGCTTCTTGCCCTGCCCTTGTTTCTTGTGCTGACATTCTCGCTTTGGCTGCCAGAGACGCCATTGCTCTGACCAATGGACCAATATATCAAGTTCCAACTGGACGCAGAGATGGTTTCGTTTCCAATTTTAGCCTTGCAGATGAAATGCCTCAAGTTACTGATTCTATTCAGATACTCAAGGCCAAGTTCCTCAACAAGGCTGCACATACAATTGGAACAACAGCATGCTTCTTCATGACAAAAAGGCTATACAACTTCTTCCCGGGTGGTGTGGGAACAGACCCAGCTATCAACCCAAACTTCCTCCCAAGGCTGAAGGCTAGGTGCCCTCAAAACGGCGATGTTAACGCTCGCCTCGCCATCGATGAAGGCGGTGGGACGGAATTTGACAAACACATTCTCAAGAACATAAGGGAAGGTTTTGCTGTCTTAGAATCTGATGCTAGGCTTAATGATGATATATTCACCAAGAGTGTTATGGATTCCTACTTTTTTTTTTTTTTGGTTAAGGTAAGGGGCCAGAAGCCCAAACAACAAAAGGAACTACACTAA 876 0.4726 MGVVVWELLWLLMVLTSCCEGQFILQVGFYRNTCPEAESIVHGVVRDAVASDPNMGAALLRLHFHDCFVEGCDASILIDVSSQPEKLAFAHQGLRGFEVIQRAKAQLEASCPALVSCADILALAARDAIALTNGPIYQVPTGRRDGFVSNFSLADEMPQVTDSIQILKAKFLNKAAHTIGTTACFFMTKRLYNFFPGGVGTDPAINPNFLPRLKARCPQNGDVNARLAIDEGGGTEFDKHILKNIREGFAVLESDARLNDDIFTKSVMDSYFFFFLVKVRGQKPKQQKELH* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0531 291 SUPERFAMILY Heme-dependent peroxidases 25 272 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo20g0531 291 Pfam Peroxidase 43 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo20g0531 291 Gene3D - 28 157 - -
Amo20g0531 291 CDD secretory_peroxidase 25 271 IPR033905 GO:0004601|GO:0042744
Amo20g0531 291 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Amo20g0531 291 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo20g0531 291 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo20g0531 291 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo20g0531 291 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo20g0531 291 PRINTS Plant peroxidase signature 244 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo20g0531 291 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo20g0531 291 Gene3D Peroxidase, domain 2 158 271 - -
Amo20g0531 291 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo20g0531 291 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo20g0531 291 PRINTS Haem peroxidase superfamily signature 261 276 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo20g0531 291 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo20g0531 291 PANTHER PEROXIDASE 15 275 - -
Amo20g0531 291 ProSiteProfiles Plant heme peroxidase family profile. 24 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo20g0531 291 PANTHER PEROXIDASE 25-RELATED 15 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0531 Amo-Chr20 6744348 6745741 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0531 1 271 Peroxidase AT2G41480 46.503 1.83e-84 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0531 K00430 - gmx:547549 380.563