Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0512 ATGGGAACCTCAAGAGATATTGCGATAGGACCTGTAGCTGTGGTGTCCCTCTTGCTTGGGAGTTTGCTTTCTAGTGAGATCAGTGACACCAAAAGCCATGACTACGTTCGCCTTGCATTCACCGCTACTTTCTTTGCAGGAGTCACTCAATTGGTACTTGGACATTGTGCATTCATGAATGGTTATTGTAGGCTTGGTTTCTTGATAGATTTCCTATCTCATGCTGCCATTGTGGGCTTCATGGCTGGAGCTGCCATTACTATTGCACTGCAACAGTTTAAAGGTCTGCTTGGCATAAAGGACTTCACCACAAATACTGATATTGTTTCTGTAATGCATTCGGTTTGGAGTAATGTGCACCATGGGGTAAATCTTTTCATCTTGCTTTATATTTATATATGTTTCAATATATTTAGATGA 420 0.4119 MGTSRDIAIGPVAVVSLLLGSLLSSEISDTKSHDYVRLAFTATFFAGVTQLVLGHCAFMNGYCRLGFLIDFLSHAAIVGFMAGAAITIALQQFKGLLGIKDFTTNTDIVSVMHSVWSNVHHGVNLFILLYIYICFNIFR* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0512 139 Pfam Sulfate permease family 1 124 IPR011547 GO:0016021
Amo20g0512 139 PANTHER SULFATE TRANSPORTER 1 136 IPR001902 GO:0015301|GO:0016020|GO:0055085
Amo20g0512 139 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0512 Amo-Chr20 6471446 6471952 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0512 1 124 Inorganic Solute Cotransporters AT1G78000 68.800 2.50e-50 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0512 K17470 - gmx:100806204 167.548