Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0463 ATGACAGGGTTCAATTATAGCTTTTACTATGTGGGTGCTAATTTTCTAGAAAGTGCAGCCGGAGAGCATCGAGTTCAAGAACATCAAGAAAATGAAGAACAAGGCATGCATAATATTCTGAATGACTATCTTCTCATCTGCAGGAGAATGGGGGCAGAGGCAGAGAAACTGCATATTATTGATAAGGATTGCATTGAAAAAGGGATTGTAGAACTTATCTGCAAGCATAATATCAAGAAGCTTGTGATGGGAGCAGCTTCTGATAAGTACCATTCTAGGTTTCTGGTGGTCTCATTCATAGTTGACCTTGAATTGTTCATTATGGTAAATGACCCCAAGGTCCGCAACCTGTTGCTGGGGGGCCAGAGAATTATATGGAGGTTCCCATCGTCCATAAAAGCATCAAAATTACCGAAGTACGAGTTCACTCCAACTAAAGGATCTCTGACATCTGGAAAACAAAATAGTCATCAAATTGATACTCCTGCTCAGCCCCAAACTCAAGTTGACATGAATCTTTCAGCAAAGTTATACTCAGCACTGCGGTTGCTGCGGGCAACTATTCTTGTACTAAGAACAAAGGAAGAACTCCTTGAACTCAATGGCATGAGCAAGGCCAAGGTAAGCAATTATGGTGATCAGATACTGGAAACCATTGAAAATACTATTAATGAGTATTACAAGTTGGATAAAAGCAGCAATGGCAGTGCTGATTCTGCAAAAAGGAGACGAGATGCAAATGGAGGCCTAGATAAAAATCTTAAGGATGATGATGAGTTGACTAAAAAAATCAAATTTGTTGAGCTTACAGTGATGATGAGTATGAACAATGAAAATGTTGGAATGATCTGTAGCAAATTTGTTGAGCATCTCTAG 876 0.395 MTGFNYSFYYVGANFLESAAGEHRVQEHQENEEQGMHNILNDYLLICRRMGAEAEKLHIIDKDCIEKGIVELICKHNIKKLVMGAASDKYHSRFLVVSFIVDLELFIMVNDPKVRNLLLGGQRIIWRFPSSIKASKLPKYEFTPTKGSLTSGKQNSHQIDTPAQPQTQVDMNLSAKLYSALRLLRATILVLRTKEELLELNGMSKAKVSNYGDQILETIENTINEYYKLDKSSNGSADSAKRRRDANGGLDKNLKDDDELTKKIKFVELTVMMSMNNENVGMICSKFVEHL* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0463 291 MobiDBLite consensus disorder prediction 230 254 - -
Amo20g0463 291 PANTHER DNA HELICASE RECQ FAMILY MEMBER 107 188 - -
Amo20g0463 291 PANTHER DNA HELICASE, ATP-DEPENDENT, RECQ TYPE-RELATED 107 188 - -
Amo20g0463 291 PANTHER DNA HELICASE, ATP-DEPENDENT, RECQ TYPE-RELATED 190 246 - -
Amo20g0463 291 PANTHER DNA HELICASE RECQ FAMILY MEMBER 190 246 - -
Amo20g0463 291 Coils Coil 288 291 - -
Amo20g0463 291 Gene3D HRDC domain 189 235 IPR044876 -
Amo20g0463 291 MobiDBLite consensus disorder prediction 235 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0463 Amo-Chr20 5847948 5850601 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0463 11 93 U-box Gene Family AT2G45910 46.988 7.51e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0463 K10901 - ahf:112765396 340.502