Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0440 ATGTTGGAGTCACTAGCTGGTCAAAGTTTTAAGCTTAAGGGATATGACTTAATCAAAGATAACAGTCCTAAATGTTATGCTATTTCATCATTCAGTAGAAGTTCTGTTTTCAAGGTTTGTTCAGATAAAAAGCAAGTGTCGCTGCTTTCACTTGGAGTTAGTTATAGGAGCACCTCCGTGTCTGAGAATTTATGTCAAAGCAAACTTCTCAATGTTCCATCATTTTATAGTTGGAAAGGATTCTATCTCTCTAAGTATACGCCATTACGGTTCGAGCGGTTGCAAACAAGTGCAACTTATGATGTTGCTGGTGCTGTTGAAGTCATCCATGATTTAGGATTGGATACTCTTACTTTCTTGGCTGTAACTGTCTTAATTGTTCCCACATTCAAGTCAATTAAAGCCAGTCCTATACTTGGTTTCTTCTTGGCTGGAGTTGTACTTAGCCAGTTTGGTTTAATCAGAAACCTTACAGATGTTAAAGTTTTGTCCGAATGGGGGATCCTTTTCTTGGTAATCTATATTGAATCATGA 534 0.3745 MLESLAGQSFKLKGYDLIKDNSPKCYAISSFSRSSVFKVCSDKKQVSLLSLGVSYRSTSVSENLCQSKLLNVPSFYSWKGFYLSKYTPLRFERLQTSATYDVAGAVEVIHDLGLDTLTFLAVTVLIVPTFKSIKASPILGFFLAGVVLSQFGLIRNLTDVKVLSEWGILFLVIYIES* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0440 177 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 56 172 - -
Amo20g0440 177 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 56 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0440 Amo-Chr20 5491477 5492711 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0440 13 172 Inorganic Solute Cotransporters AT4G04850 50.617 5.48e-36 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0440 - - aprc:113858933 212.616