Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0365 ATGGATTCTGATTTCTGGACCTCGCGTATCGCCGCCGCCAAACGCCACCATGCCCTTCACCACCATCACCAACCTTCCCACTTTGATCGTTTAGGAGTGGATGATTTTGATATGGAAGATGGGGTTCGACCTGATTTTCCATGCCCCTATTGCTATGTGGAGCTCGACATCCTTTCCCTTTGTTCCCATCTCGAAGACGAGCATTCCTGCGAATCCAAAGTCACGATTTGTCCGATATGCTCAGCTAAAGTTGCGCGGGATATGTTGAGTCACATAACGCTCCAGCATGCACACTTGTTCAAATTACAGAGACGACGAAGGTTAAGAAGAGTTGCCATTCCTAACAGTCAGGCATTGTCTCTGTTGGGCCGAGATCTTCGCGAGGCTCATTTGCAGGTGCTTCTTGGTGGTGGATACCGAACAAGCAGCACTAGTACTGTGACTAATGCTATTACTGATCCCTTACTATCCTCACTTATTTTTAATTTCCCTGCTTTGGAAGCAGAAGAAATTTGTAAATCTGAGGTAACACATGTTGAAGATTCCTCTTCGAATCCGGCACCTGTACATATCTGGAAATCAAGGTGCTCTTCATTATCCTTTTCTGATAAAAAGACAATCAAAGTTCTTGCTTGA 636 0.4528 MDSDFWTSRIAAAKRHHALHHHHQPSHFDRLGVDDFDMEDGVRPDFPCPYCYVELDILSLCSHLEDEHSCESKVTICPICSAKVARDMLSHITLQHAHLFKLQRRRRLRRVAIPNSQALSLLGRDLREAHLQVLLGGGYRTSSTSTVTNAITDPLLSSLIFNFPALEAEEICKSEVTHVEDSSSNPAPVHIWKSRCSSLSFSDKKTIKVLA* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0365 211 Pfam Stress-induced protein Di19, C-terminal 119 204 IPR027935 -
Amo20g0365 211 Pfam Drought induced 19 protein (Di19), zinc-binding 45 97 IPR008598 -
Amo20g0365 211 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 205 - -
Amo20g0365 211 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 205 IPR033347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0365 Amo-Chr20 4650135 4652999 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0365 - - qsu:112040972 304.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0365 20 4650135 4652999 Amo20g0365 20 4650135 4652999 ECH
Amo20g0365 20 4650135 4652999 Amo13g4278 13 137900958 137903955 ECH