Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo20g0337 | ATGGAACATCATAACAAGTTGTTTCTTCTACTCATGCTTCTTATTCAAGTTCTGCTTGTAGCAGCACAAACAAACAGCCAAGACTATAATGGCTTAGCAGCTCTTACAGGATTCTGGACTAACAGACCACCAAATTGGGTTGGTACAGATCCTTGTGGCAGTAATTGGGAAGGAATTCGTTGCTCCAACTCAAGGATTACAGAATTGAAACTGTTAAGCATGAATTTGGAGGGACAACTGTCTTCAGCAATCCAACAATTACCTGAACTAGACACATTGGATCTTTCTTACAACACTGGCTTGACAGGAACGATTCCACAAGAAATTGGGAGTTTGAAGAAGCTAAAATCCCTCGCCTTGGTTGGTTGTGGTCTCTCTGGTCCTATACCAGACTCTATTGGAGCTTTGAAGCAACTAACCTTTCTAGCACTTAATATGAATCGGTTCAACGGAACAATTCCGGGCTCCATTGGCAATCTGACTAATATCAATTGGCTTGATGTTGCTGATAATCAACTTGAAGGACAAATTCCTGTATCTGATAACAAAGGAAGACCAGGACTTGACCTGCTCCTTCAGGCACAACACTTTCATATGGGGAACAATAAGTTCTCTGGTCAATTACCGGAAAAACTGTTCAATTCAAAAATGATACTAAAACATGTGCTTTTGGACAACAATCAACTGCAGGGTAGTATTCCTAGCTCCCTTGGTCAAGTGAGCACATTGGAGGTGTTGCGCTTAGATACAAATGGATTTAGCGGAGCAGTGCCTTCAACTTTAAAGAATCTTGGACAGCTGAGTGAGCTGTATTTATCCCATAATAAGCTAAATGGCTCTCTGCCGGACCTTACCGGATTGAACAGTCTCTCCTATGTGGATATGAGCAACAATTCTTTCAACGATTCTGATATTCCATTATGGGTTTCAAGTTTGCAATCTCTGACAACTGTGCTACTAGGGGACAACCAGCTGAGTGGCACATTGAATCTTACCAGTGGCTACAGTAACAGTCTGCAGCTCATTGATTTGCAGGATAATCAAATAACCGATTACAAGCCAGGAAGCAAAAAGATAAATTTCCAAGTGGTGTTAGCTGGTAATCCAATTTGTCATGAATCTGAAGCTCAAAAACTGAGTTATTGCCAACTGCCCCTACAAACTCCTGCATACACAACACCACTAAATAATTGCTCCGCTCAATCATGCTCTTCTGGTCAGGTTTCCAGCCCAAATTGTAAATGTGCATATCCCTATACTGGAACACTCTACTCCAGAGCTCTTAGTTTCACAACCCTTAACGATACTGATTACAAGGAGCTTGAGCAGTCTTTGTTGAAGAGCTTTGCGTCCCAAAAGCTTCCTGTGGATTCAGTTTCTCTGAGTAATCCCTCAAGGAATGCATCTAACAACAATTTTCAGTTGACTCTGGATGTCTTCCCATCTCAAACTGATCGTTTCAATAGAACTGGAGTTTCAAGTGTTGCTTTTGTGCTAAGTAACCAAATTTTCAAGCCCCCGGAATTTTTCTCCCCTTACTTCTTCAATGGTCTCAACTATCAATACTATGGAGGAGAACCTAAATCAAAGTCAAAGCATACCGGAGCTATAATTGGTGCAGTAGTTGCTGTTGTGGTGTTTCTTGGATTAGCATTCGTCATAGGCATGTATGCCCTCCGCCAGAAAAGAAGAGCAGAAAGATCTGAACTCAATCCTTTTGCAAATTGGGAACAGAACCCGAATAGTGGAGCTGCTCCTCAGTTGAAAGGAGCGCGATGGTTTTCTTTCGAAGATCTGAGGAAATACACCAACAACTTCTCAGAAAGTAATACTATTGGAAGTGGGGGCTATGGAAAGGTGTACCAAGGTGTTCTTCCTGCTGGGGAAGTGGTTGCCATCAAGCGGGCTGCACAAGAATCTATGCAAGGTGCTGTTGAGTTTAAAACTGAGATTGAACTTCTTTCAAGGGTCCACCATAAGAATCTTGTTAGTCTTGTGGGTTTCTGCTTTGAGAAGGGTGAACAAATGCTGGTGTACGAGTATGTTCCAAATGGTACTATAATGGATAGTCTTACAGGAAAGTCTGGGATATCGATGGATTGGATACGGAGGCTGAAAGTCGCGTTGGGCGCAGCGAGGGGTCTGGCATATCTTCATGAACTTGCTAACCCACCAATCATACACAGAGACATAAAATCAAGCAATATCCTACTTGATAATCACCTTAATGCAAAAGTGGCTGATTTTGGTCTCTCAAAACTTCTTGTTGATAGTGAAAGGGGCCATGTCACTACTCAAGTCAAAGGGACAATGGGATACTTGGATCCTGAATATTACATGAGCCAGCAATTGACCGAAAAGAGCGATGTATATAGCTTTGGAGTGGTGATGCTTGAGCTAGTAACAGCGAAAAGGCCAATAGAGCAAGGGAAGTATATTGTGAGAGAGGTAATGAGGGTAATGGATACATCAAAAGACTTGTACAATCTTCACTCTATTGTTGATCCAACCATAGTCAGAAGCACAAGTCCTAAGGGGTTAGAGAAGTTTGTTGAAGTGGCAATGAGGTGTGTGAAAGAATATGCATCTGAGAGGCCTTCTATGGCTGAGGTTGTGAAAGAGATTGAGAACATAATCCAACTTGCTGGTTTGAACCCGAGTGTTGAATCAGCTTCCACCACAGAAAGCTATGAGGTGCCACTTGGGCAAAATGTCAAACACCTTTATGACAATGAAGATTTTAGCCATTCTGGAAACTTCCCAACAGCAAAGATAGAACCTCAATGA | 2787 | 0.4209 | MEHHNKLFLLLMLLIQVLLVAAQTNSQDYNGLAALTGFWTNRPPNWVGTDPCGSNWEGIRCSNSRITELKLLSMNLEGQLSSAIQQLPELDTLDLSYNTGLTGTIPQEIGSLKKLKSLALVGCGLSGPIPDSIGALKQLTFLALNMNRFNGTIPGSIGNLTNINWLDVADNQLEGQIPVSDNKGRPGLDLLLQAQHFHMGNNKFSGQLPEKLFNSKMILKHVLLDNNQLQGSIPSSLGQVSTLEVLRLDTNGFSGAVPSTLKNLGQLSELYLSHNKLNGSLPDLTGLNSLSYVDMSNNSFNDSDIPLWVSSLQSLTTVLLGDNQLSGTLNLTSGYSNSLQLIDLQDNQITDYKPGSKKINFQVVLAGNPICHESEAQKLSYCQLPLQTPAYTTPLNNCSAQSCSSGQVSSPNCKCAYPYTGTLYSRALSFTTLNDTDYKELEQSLLKSFASQKLPVDSVSLSNPSRNASNNNFQLTLDVFPSQTDRFNRTGVSSVAFVLSNQIFKPPEFFSPYFFNGLNYQYYGGEPKSKSKHTGAIIGAVVAVVVFLGLAFVIGMYALRQKRRAERSELNPFANWEQNPNSGAAPQLKGARWFSFEDLRKYTNNFSESNTIGSGGYGKVYQGVLPAGEVVAIKRAAQESMQGAVEFKTEIELLSRVHHKNLVSLVGFCFEKGEQMLVYEYVPNGTIMDSLTGKSGISMDWIRRLKVALGAARGLAYLHELANPPIIHRDIKSSNILLDNHLNAKVADFGLSKLLVDSERGHVTTQVKGTMGYLDPEYYMSQQLTEKSDVYSFGVVMLELVTAKRPIEQGKYIVREVMRVMDTSKDLYNLHSIVDPTIVRSTSPKGLEKFVEVAMRCVKEYASERPSMAEVVKEIENIIQLAGLNPSVESASTTESYEVPLGQNVKHLYDNEDFSHSGNFPTAKIEPQ* | 929 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo20g0337 | 928 | CDD | STKc_IRAK | 612 | 878 | - | - | |
Amo20g0337 | 928 | Pfam | Protein kinase domain | 607 | 873 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo20g0337 | 928 | Gene3D | Ribonuclease Inhibitor | 184 | 410 | IPR032675 | - | |
Amo20g0337 | 928 | SUPERFAMILY | L domain-like | 40 | 372 | - | - | |
Amo20g0337 | 928 | SUPERFAMILY | Protein kinase-like (PK-like) | 586 | 875 | IPR011009 | - | |
Amo20g0337 | 928 | ProSiteProfiles | Leucine-rich repeat profile. | 266 | 288 | IPR001611 | GO:0005515 | |
Amo20g0337 | 928 | Gene3D | Transferase(Phosphotransferase) domain 1 | 682 | 892 | - | - | |
Amo20g0337 | 928 | Gene3D | Ribonuclease Inhibitor | 32 | 183 | IPR032675 | - | |
Amo20g0337 | 928 | SMART | serkin_6 | 606 | 881 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo20g0337 | 928 | Pfam | Leucine rich repeat | 242 | 299 | IPR001611 | GO:0005515 | |
Amo20g0337 | 928 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 726 | 738 | IPR008271 | GO:0004672|GO:0006468 | |
Amo20g0337 | 928 | PANTHER | RECEPTOR-LIKE PROTEIN 55 | 6 | 899 | - | - | |
Amo20g0337 | 928 | ProSitePatterns | Protein kinases ATP-binding region signature. | 612 | 634 | IPR017441 | GO:0005524 | |
Amo20g0337 | 928 | ProSiteProfiles | Protein kinase domain profile. | 606 | 879 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo20g0337 | 928 | PANTHER | RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED | 6 | 899 | - | - | |
Amo20g0337 | 928 | Gene3D | Phosphorylase Kinase; domain 1 | 577 | 681 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo20g0337 | Amo-Chr20 | 4415750 | 4421775 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo20g0337 | 8 | 928 | Receptor kinase-like Gene Family | AT5G49760 | 52.947 | 0.0 | 941 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VIII-1 | Amo20g0337 | Pkinase | 5e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo20g0337 | - | - | gmx:100786172 | 1358.58 |