Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0330 ATGGGGACTTTTTCTTCTTCTTCTTTCCTTTTTCTTGCTCAGATTTTCTTTATTCTCTGGCAGCTTCTATGTTTGACAGTTGAAGCTTTCAACAATAGTAGTAATAATAAGATATCTGCCTTCTATGTGTTTGGAGACTCCACCGTTGACCCTGGAAACAATAACTACATTGACACGCCTTTCAAATGCAACTTTCCGCCTTATGGCATGGATTTCCCTAACCATGTTCCTACTGGAAGATTCTGCAATGGCAAGCTTGCCACTGATTACATTGCTTCCTATGCAGGACTCAAGAAATCGTTTCTTCCAGCTTATTTGGATCCAAATCTCAGCGTTGAAGAGCTTATCACAGGTGTTAGTTTTGCCTCTGCTGGTTCTGGCTTTGACCAACTTACACCATCAATCAGTAATGTGATTCCAATAGGAAAACAATTGGAATATTTTAGAGAATGCAAAAAGAAGTTAGAGGTTAAGCTTGGTAAAGAAGGAACCAAGAATCATCTAGAAAAGGCTGTGTTTTTCTTGAGTGCTGGTACCAACGACTTCGTTCTTAATTATTTCGCTCTACCAATTAGAAGAAAGAGTTTTACTATCTTATCCTACCAGCAATTCTTGATCCAACATGTGAAACAATTTATTCAGGATGTGGTGGCAGAAGGTGGTAGAAAAATTGCAGTTGCCGGAGTACCTCCAATGGGATGCTTACCTTTGATGATCACCTTAAATTCCCCTAATGACATTCTCCATCGTCATTGCATCGATCACTATTCATCCATTGCAAGAGATTACAACCATCTCCTTCAACAAGAGTTACATCTTTTTCAATTCCACCTCAATAATAATAATATATCTACCTCCCCAACTAAAATCTATTATGTTGACATATATGGCCCATTAGCCCAAATGATCCAAGCACCTCAAAAATTCGGATTTGATGAGGTTGGTAGTGGGTGTTGTGGAAGTGGGTATATTGAAGCATCAGTACTGTGTAACAAGTTTTCAGGTGTTTGTTTAGATCCATCCAAGTATGTTTTCTGGGATTCAATTCACCCAACAGATAAAGCATATCACAATCTGTTCTTGGCTAAACTCCCCACCATTGATTTCATCATCAACGGCTAG 1122 0.3886 MGTFSSSSFLFLAQIFFILWQLLCLTVEAFNNSSNNKISAFYVFGDSTVDPGNNNYIDTPFKCNFPPYGMDFPNHVPTGRFCNGKLATDYIASYAGLKKSFLPAYLDPNLSVEELITGVSFASAGSGFDQLTPSISNVIPIGKQLEYFRECKKKLEVKLGKEGTKNHLEKAVFFLSAGTNDFVLNYFALPIRRKSFTILSYQQFLIQHVKQFIQDVVAEGGRKIAVAGVPPMGCLPLMITLNSPNDILHRHCIDHYSSIARDYNHLLQQELHLFQFHLNNNNISTSPTKIYYVDIYGPLAQMIQAPQKFGFDEVGSGCCGSGYIEASVLCNKFSGVCLDPSKYVFWDSIHPTDKAYHNLFLAKLPTIDFIING* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0330 373 CDD SGNH_plant_lipase_like 40 357 IPR035669 -
Amo20g0330 373 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 11 369 - -
Amo20g0330 373 Pfam GDSL-like Lipase/Acylhydrolase 42 360 IPR001087 GO:0016788
Amo20g0330 373 Gene3D SGNH hydrolase 28 365 IPR036514 -
Amo20g0330 373 PANTHER GDSL ESTERASE/LIPASE EXL3 11 369 - -
Amo20g0330 373 SUPERFAMILY SGNH hydrolase 172 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0330 Amo-Chr20 4370922 4376778 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0330 10 357 Pollen Coat Proteome AT1G75930 35.127 4.80e-54 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0330 - - adu:107468364 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0330 20 4370922 4376778 Amo20g0330 20 4370922 4376778 ECH