Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0329 ATGGAGTTGGTGGTGGTGAGAATGATGATAATAACAATGGCATTAATAATAATAATGCCATTATATTATTCAGTAGTTGCTAAAGTGGACATTGGTCTCGTGAGGCAATTGGCTGCAAAGAACAATGTTTCATGCATATTGGTTTTTGGAGACTCAAGTGTTGACCCTGGCAACAACAATGTCCTTGGCACCACCATGAAAAGCAACTTCCCTCCTTATGGCAAGAACTTCTTTAACGCCCGCCCAACCGGAAGGTTTAGTAATGGCAGACTTGCCACTGATTTCATTGCTGATGAAGCAATGGGGTTCAGAAAAATAGTTCCACCATTTCTTGACCCAAATTTGAAGCTAGAAGATCTGCCATACGGTGTTAGTTTTGCATCAGCAGCTACAGGTTATGATGATCTTACTGCCAATATTTCGAATGTTCTACCAGTATCCAAACAACTAGAGTATTTTGAGCATTACAAGATTCACATGAGGAAATTGTTGGGAGAGAAAAGAGCTGAATTCATTATAAGGAATGCATTGTATGTGATAAGTATGGGCACAAATGATTTCCTACAAAACTATTTCTTGGAGGATACTCGCCCAAAGCAATACAGCTTGCAGAAGTTTGAGGAATTCTTGCTCTCCCAAATGACTAAGGACATTGAGATGATGCATAGGCTAGGGGCCCAGAGGTTAGTTGTTGTTGGGGTCCTACCACTTGGGTGCATTCCACTTATGATGACCCTTAAGAACACCAAGACTTGTGATACAACTTTGAACAATGTGGCCCACTCATTCAATGCAAAGCTATCACTCCAATTGACCCAATTGAAGGCCCAATTGGGCATGAAGACCGCTTATGTTAATGTTTTTGGTATGATCCAAAACGCAGTATTGGACCCCCAAAAATACGGTTTTGTGGAAACTACAAAAGGATGCTGTGGAACAGGGTTAGTAGAATATGGTGATTCATGCAAAGGGTTGACTACTTGTTCAGATCCTGATCAATACATCTTCTGGGATGCTGTTCATCCAACCCAGAAGATGTACAAGATTATCGCTGATGAGGCCATTGAATCCATCGCTAATGAAATTGTTTAG 1092 0.4093 MELVVVRMMIITMALIIIMPLYYSVVAKVDIGLVRQLAAKNNVSCILVFGDSSVDPGNNNVLGTTMKSNFPPYGKNFFNARPTGRFSNGRLATDFIADEAMGFRKIVPPFLDPNLKLEDLPYGVSFASAATGYDDLTANISNVLPVSKQLEYFEHYKIHMRKLLGEKRAEFIIRNALYVISMGTNDFLQNYFLEDTRPKQYSLQKFEEFLLSQMTKDIEMMHRLGAQRLVVVGVLPLGCIPLMMTLKNTKTCDTTLNNVAHSFNAKLSLQLTQLKAQLGMKTAYVNVFGMIQNAVLDPQKYGFVETTKGCCGTGLVEYGDSCKGLTTCSDPDQYIFWDAVHPTQKMYKIIADEAIESIANEIV* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0329 363 Pfam GDSL-like Lipase/Acylhydrolase 46 353 IPR001087 GO:0016788
Amo20g0329 363 PANTHER GDSL ESTERASE/LIPASE EXL3 11 361 - -
Amo20g0329 363 Gene3D SGNH hydrolase 32 362 IPR036514 -
Amo20g0329 363 SUPERFAMILY SGNH hydrolase 177 358 - -
Amo20g0329 363 CDD SGNH_plant_lipase_like 45 358 IPR035669 -
Amo20g0329 363 PANTHER GDSL ESTERASE/LIPASE 11 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0329 Amo-Chr20 4355896 4359304 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0329 25 362 Pollen Coat Proteome AT1G75930 33.621 5.76e-57 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0329 - - gmx:100819691 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0329 20 4355896 4359304 Amo20g0329 20 4355896 4359304 ECH