Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0326 ATGCCTAAGGAAGCCTATACATCAAAACATACAAAAGAAACTCCAACAAACTGTTTATGCAGCATGCATTATTGCCCTTCAACTATTCTTCAATCACTTGCAATGACTTGGCTCTTCTTTTTTCTTGTTTTCATCATGAATGCAAACTCCCATGAGGCCAAGAATGAATGCAACAAAGTTATATCAGTTGGGGTGATTATGGATGCTAATTCTCGTGTGGGGAAAGAGCAGAGAGTAGCCATGGAAATTGCAGCACAAACTTACAATAGCACTTCAAAGAACTACAAGTTGTCTCTCCATTTTCATAACTCTACCATGGACCCCATAAGTGACACCAATCTTGCGGAAGAAATGATAAGAATGCAGAAAGTGCAAGTGATTTTAGGCTTCCACACATGGCCAGAAGCAGCTCTTATAGCTGAAATAGGATCGCGGTTTCAAGTTCCTATTATATCCTATGCAGAACCTTTGATTACTCCACCATTGATGTCAATCCGGTGGCCATTTTTGGTAAGAATGGCCAACAGTGGCAGAGCATATGTAAAATGCATTGTGGAAATAGTCAAAGCTTATGGCTGGCAAAGAGTAATAGCCATCTATGAAGATGATGCCTATGGTGGAGAACAAGGGATGCTAGCCCTGCTATCTGAGGCCCTCCAAGATGCAAATTCAATGATTGAATACAATTTATTCTTCCACCAATTTCTTCTTTGCATGATCCAAGAGGGCTAG 732 0.4057 MPKEAYTSKHTKETPTNCLCSMHYCPSTILQSLAMTWLFFFLVFIMNANSHEAKNECNKVISVGVIMDANSRVGKEQRVAMEIAAQTYNSTSKNYKLSLHFHNSTMDPISDTNLAEEMIRMQKVQVILGFHTWPEAALIAEIGSRFQVPIISYAEPLITPPLMSIRWPFLVRMANSGRAYVKCIVEIVKAYGWQRVIAIYEDDAYGGEQGMLALLSEALQDANSMIEYNLFFHQFLLCMIQEG* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0326 243 PANTHER GLUTAMATE RECEPTOR 3.4 40 232 - -
Amo20g0326 243 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 40 232 - -
Amo20g0326 243 Gene3D - 56 178 - -
Amo20g0326 243 SUPERFAMILY Periplasmic binding protein-like I 58 231 IPR028082 -
Amo20g0326 243 Pfam Receptor family ligand binding region 79 226 IPR001828 -
Amo20g0326 243 Gene3D - 179 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0326 Amo-Chr20 4339625 4340471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0326 41 228 Ion Channels AT4G31710 32.105 3.71e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0326 - - ahf:114924053 494.197