Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0319 ATGGAAGAAGCTGCTTCAAACACCATCAAAATCTCCCAACGCACTCTCATCTTCCCTTCTCGCACTCCCTTCTCCCAAAACCACGCCCTCCCTCTCTCCCCCCTCGACAACGACCCCAACCTCCGCCTCACTTTCCGCTACCTCCGCCTCTACATTTCCTCCCACCCCGACCCCTACGCCCTCATCTCCTCCTCCCTCTCCCAAGCTCTTCTTCACTACTACCCACTCGCCGGCACGCTTCGCTACCGTCTACATGACAACCGCCTCGAGAACTGGTGCGCTGCCGGTCAGGGAGTTCCCCTCATTCGCGCCACCGCCGCAGACATCACCCTCGAATCGGTAAACTACCTCGACGACCCGGATTTCACCTTCGTTGAGCAGTTAGTACCCGACCCGGGACCCGATGAGGGGATGGAGCACCCCTGCATGCTCCAAATAACGGTGTTTGGGTGCGGTGGGTTCACGCTGGGTGCTGCCATGCACCACGCGCTTAACGACGGTATGGGCGGGAGCTTGTTCTTCAATGCGGTGGCCGAGTTGGCTCGCGGATCGAGTTTGATATCGGTTGAACCGGTTTGGAACCGTGAGGTATTGTTGGGAGCGAGGAATCCGCCCCGGGTGGAGTCAGCGTTGGTAGGAGAGTTTTTGAGTTTGGAGAAGGGGGTTTTTCCGTACCAAGCGGACGCCGGTGATGTTGCGAGGGAGTGCTTCCACGTTCAGGAGGAGTCCTTGGAAGCGTTCAGGAGATCATTGTTTGAACAATCCGGTCTCAAATTCACCACTTTTGAGGTTCTTGCTGCTTATGTTTGGAGGTCCAAGGTTAGGGCGTCGGAAATGAAGGACAATGAGAAGGTTAAGTTGGCATACTCGGTTAACATACGAAGAGTGGTAAAGCCAGCACTGCCAGATGGGTATTGGGGTAACGGTTGCGTTCCAATGTATGTTGAGGTGAGTGTGAAGGATTTAATAGAGAGGCCCATTTGGGAAACAGCGGAGCTGATCAAGAAGAGCAAGAGCAACGTGAGTGATGAGTATGTTCGGTCATTCATCGATTTTCAGGCAGTGCATTATGGGGATGGGATCACTGCAGGGAAAGGGGTTACTGGGTTCACCGATTGGAGACACTTGGGCCACTCGTCTGTGGACTTTGGATCCGGAGGCCCAGTTACTGTTTTGCCACTTGGCAGGAACCTCCTTGGGAGTGTTCACCCTTGCTTCTTCTTGCCTTATTCAACTGCCACTAAGAAGGAGGGTTTCAAGGTTTTGGTCACCCTGCCTCAACCTGCTTTGCCTGCTTTTCGAGAGGATATGCACGTTTTTTCCCCCTAG 1329 0.5418 MEEAASNTIKISQRTLIFPSRTPFSQNHALPLSPLDNDPNLRLTFRYLRLYISSHPDPYALISSSLSQALLHYYPLAGTLRYRLHDNRLENWCAAGQGVPLIRATAADITLESVNYLDDPDFTFVEQLVPDPGPDEGMEHPCMLQITVFGCGGFTLGAAMHHALNDGMGGSLFFNAVAELARGSSLISVEPVWNREVLLGARNPPRVESALVGEFLSLEKGVFPYQADAGDVARECFHVQEESLEAFRRSLFEQSGLKFTTFEVLAAYVWRSKVRASEMKDNEKVKLAYSVNIRRVVKPALPDGYWGNGCVPMYVEVSVKDLIERPIWETAELIKKSKSNVSDEYVRSFIDFQAVHYGDGITAGKGVTGFTDWRHLGHSSVDFGSGGPVTVLPLGRNLLGSVHPCFFLPYSTATKKEGFKVLVTLPQPALPAFREDMHVFSP* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0319 442 PANTHER ACYL TRANSFERASE 4 9 440 - -
Amo20g0319 442 Gene3D - 8 212 IPR023213 -
Amo20g0319 442 Pfam Transferase family 9 438 - -
Amo20g0319 442 Gene3D - 224 436 IPR023213 -
Amo20g0319 442 PANTHER N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE, PUTATIVE-RELATED 9 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0319 Amo-Chr20 4295847 4297888 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0319 61 395 Monolignol Biosynthesis Gene Families AT5G48930 29.107 1.74e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0319 - - gmx:100817021 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0319 20 4295847 4297888 Amo20g0319 20 4295847 4297888 ECH