Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0292 ATGGCTTCCCGTGAAAATTTTGTCTACATCGCCAAGCTCGCTGAACAAGCCGAGCGCTACGAAGAAATGGTGGACGCGATGAAGAATGTGGCGAAGCTTAACGTTGAATTAACCGTTGAAGAGAGGAACCTTCTTTCAGTTGGGTACAAGAACGTGGTTGGTTCGCGCAGGGCTTCGTGGAGGATCCTTTCCTCCATTGAGCAGAAGGAGGAAGCTAAAGGGAACAATGTCAGTGTTCAGCGCATAAAGGACTACAGGAAGAAAGTGGAATCTGAGTTGTCAAACATTTGCAGTGATATCATGGATGTTATTGATAATCATCTTATTCCCATGGCCGCTGGTGAATCCAGTGTCTTTTTCAACAAAATGAAAGGTGACTATTACCGGTATCTTGCCGAGTTTAAGGCCGGAGATGAGAGAAAAGAGGCTGCTGATCAGTCCATGAAAGCATATCAGGAAGCTTCCTCCATAGCAGACACTGAATTACCACCCACTCACCCCATAAGATTGGGTTTGGCTTTGAATTTCTCTGTTTTCTACTATGAAATCTTGAACTCTCCTGAAAGGGCCTGTCACCTTGCTAAACAGGCTTTTGATTTAGCGATCTCTGAGTTGGATACTCTGAGTGAGGAGTCTTACAAAGACAGCACACTAATTATGCAGCTTCTGAGGGACAACCTCACCTTGTGGACTTCTGACATCCCTGAAGAAGGAGCTGAGGAACAAAAGGTGGAATCTGCCCGAGCTCCAGGAGGTGAAGCTGCAGAGTAA 771 0.4591 MASRENFVYIAKLAEQAERYEEMVDAMKNVAKLNVELTVEERNLLSVGYKNVVGSRRASWRILSSIEQKEEAKGNNVSVQRIKDYRKKVESELSNICSDIMDVIDNHLIPMAAGESSVFFNKMKGDYYRYLAEFKAGDERKEAADQSMKAYQEASSIADTELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDLAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEEGAEEQKVESARAPGGEAAE* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0292 256 MobiDBLite consensus disorder prediction 235 256 - -
Amo20g0292 256 PRINTS 14-3-3 protein zeta signature 36 65 IPR000308 -
Amo20g0292 256 PRINTS 14-3-3 protein zeta signature 85 109 IPR000308 -
Amo20g0292 256 PRINTS 14-3-3 protein zeta signature 115 137 IPR000308 -
Amo20g0292 256 PRINTS 14-3-3 protein zeta signature 150 176 IPR000308 -
Amo20g0292 256 PRINTS 14-3-3 protein zeta signature 177 203 IPR000308 -
Amo20g0292 256 PRINTS 14-3-3 protein zeta signature 204 233 IPR000308 -
Amo20g0292 256 PANTHER 14-3-3 DOMAIN-CONTAINING PROTEIN-RELATED 2 241 - -
Amo20g0292 256 PANTHER 14-3-3 PROTEIN 2 241 IPR000308 -
Amo20g0292 256 PIRSF 14-3-3 1 245 IPR000308 -
Amo20g0292 256 ProSitePatterns 14-3-3 proteins signature 1. 42 52 IPR023409 -
Amo20g0292 256 SUPERFAMILY 14-3-3 protein 1 233 IPR036815 -
Amo20g0292 256 SMART 1433_4 4 244 IPR023410 -
Amo20g0292 256 Coils Coil 10 30 - -
Amo20g0292 256 ProSitePatterns 14-3-3 proteins signature 2. 213 232 IPR023409 -
Amo20g0292 256 Gene3D - 1 246 IPR036815 -
Amo20g0292 256 Pfam 14-3-3 protein 11 231 IPR023410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0292 Amo-Chr20 4036946 4039594 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0292 4 256 14-3-3 family AT2G42590 77.432 5.07e-147 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0292 K06630 - gmx:100807980 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0292 20 4036946 4039594 Amo20g0292 20 4036946 4039594 ECH