Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0281 ATGATTTTCAAGACACTAGAAGAAGCTGGAAAGTTCTACAAATATTATTCCAAGCTTGCCAACAAGATTAAGAATCAACTAATCGTATGCACTAGAGAGGGGAGGTGGAAATCCAAGATATTTCCAACTTTGAAGACAAACCCTTCAGCTGGGTTAAATTGTCCGGCCAGGATTTACGTACACATAATAAAGGATGTTGGTCTTTGGACAATTTCCAAAGTTGTTTCGAATCACTCACATCCTTGCTGTCCAGACCGGGCAGAGATGCTCAAACAACACAGGGAGCTTAACATGTTTGTGCATCGCACCATCGAAACCAATGAGGAAGCCGAAATCAGACCGAGCAAAACTTACCAATTATTTGTGGCAGCAGCTCGCAGCCACCGTGAACTAACGCTGTACGAGGATCGGCATATATGGATTCCAGTTTACTTGGATCACCACTTCTGGGCCGGGATGAGAAGCACACAAAGGAGCAATATCATGCATTCATTTTTCAACAAGTTCATTACACGCAACAGCTCCTTGAGACAATTCGTCAAGCAATATGACAATTGCCTAGCAAGCAGAGAGGAAACAGAGAGAGTATTCGACGCTGCAGATTTTCACATTGTGATACTGTGTGCAACAAAATCAGCAATAGAGGCCCAGTTTCTGCATGTGTATACCCATGAGAAGTTTATGGAAGTTCAAGCTCAATTTAGAGGTAAAGTGAACTGTATCACAAGATCAATGCATTCCACCCTAGGTTTCACAATATACGAAGTCGTAGAGCAGGTTTTCAACCTCCACATTTAA 798 0.4236 MIFKTLEEAGKFYKYYSKLANKIKNQLIVCTREGRWKSKIFPTLKTNPSAGLNCPARIYVHIIKDVGLWTISKVVSNHSHPCCPDRAEMLKQHRELNMFVHRTIETNEEAEIRPSKTYQLFVAAARSHRELTLYEDRHIWIPVYLDHHFWAGMRSTQRSNIMHSFFNKFITRNSSLRQFVKQYDNCLASREETERVFDAADFHIVILCATKSAIEAQFLHVYTHEKFMEVQAQFRGKVNCITRSMHSTLGFTIYEVVEQVFNLHI* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0281 265 PANTHER OS06G0517100 PROTEIN 3 115 - -
Amo20g0281 265 PANTHER OS06G0517100 PROTEIN 133 255 - -
Amo20g0281 265 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 3 115 IPR031052 GO:0006355
Amo20g0281 265 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 133 255 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0281 Amo-Chr20 3936231 3937914 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo20g0281 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0281 - - aip:107612320 238.81