Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo20g0251 | ATGGATCAAGCCGCAAGTGAGGGGATTGGTGAGGTAATGGATCCTGTTCATGAAAGAGTTGATGATAATTTGAGTCATGAACCTGATGGGGCTGCAGTTGATGCAGTAGGTAGGGGTAGCTTGGGTGAGAGAGTCACTATAAGTGGAGAAGTTGGAACTTCAGAACAAAAGGGTAAGGATTTGGGATCAGATAAGGAGTTAAAGGTGGAACCTGAGGAAGTTGAGAGTGGGAAGAAGTGTGATTACCAAAAAAACAGTGAAACAATGTCTGAGGTTGATCAAGGAACTAGTTATAATTCAAGCAATTTGGTTAATCAGCAAGTGGTTGAAACCGTGGTTGTAATAGAGGCTGTTCAGAGTGAGTGTGTTAACAGGGACAGTATGAAATTGGAGCTGAAGGTAAATGAATCAGGGTTGAGCAAAGTATCTGTGAGAGCACCCAAAGGGGTTTCCGAAATGACAGATAAGAATTCTTGTGTGATTGATATAAGGTGCACCAACCACAAACGGTTTAGTGAGAGTTCAGAAGGTGAAAGGATTTGTAGGATTTGCCACCTTGCTTCTGGGAGACCATCAGATGCAACAGCTGTTGGAACTGCCAATGGTGCTACTAGTACTGATTTGATTCAGCTTGGTTGTTCATGTAAGGATGAGCTTGGCATTGCGCATATTCATTGTGCTGAGGCCTGGTTCAAGCTTAAAGGAAACAGGTACTTGTGTTGTTATCAATAG | 732 | 0.4276 | MDQAASEGIGEVMDPVHERVDDNLSHEPDGAAVDAVGRGSLGERVTISGEVGTSEQKGKDLGSDKELKVEPEEVESGKKCDYQKNSETMSEVDQGTSYNSSNLVNQQVVETVVVIEAVQSECVNRDSMKLELKVNESGLSKVSVRAPKGVSEMTDKNSCVIDIRCTNHKRFSESSEGERICRICHLASGRPSDATAVGTANGATSTDLIQLGCSCKDELGIAHIHCAEAWFKLKGNRYLCCYQ* | 244 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo20g0251 | 243 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 173 | 243 | IPR011016 | GO:0008270 | |
Amo20g0251 | 243 | SMART | ringv_2 | 180 | 241 | IPR011016 | GO:0008270 | |
Amo20g0251 | 243 | MobiDBLite | consensus disorder prediction | 21 | 79 | - | - | |
Amo20g0251 | 243 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 174 | 243 | IPR013083 | - | |
Amo20g0251 | 243 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE MARCH-RELATED | 1 | 237 | - | - | |
Amo20g0251 | 243 | MobiDBLite | consensus disorder prediction | 57 | 79 | - | - | |
Amo20g0251 | 243 | PANTHER | ZINC FINGER, RING-CH-TYPE | 1 | 237 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo20g0251 | Amo-Chr20 | 3427563 | 3428294 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo20g0251 | 161 | 237 | C3H Transcription Factor Family | AT5G05830 | 41.558 | 1.01e-11 | 60.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo20g0251 | - | - | gmx:100791720 | 265.388 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Amo20g0251 | 20 | 3427563 | 3428294 | Amo20g0251 | 20 | 3427563 | 3428294 | ECH | |
Amo13g5703 | 13 | 159022942 | 159025594 | Amo20g0251 | 20 | 3427563 | 3428294 | PCT | |
Amo20g0251 | 20 | 3427563 | 3428294 | Amo13g5703 | 13 | 159022942 | 159025594 | PCT |