Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0190 ATGGGCTGTGTCAATGGCAAGTGTTGTAACCGGTACTCCACACCGTCAGAGGGTGGCTCCAGGGACTACAGAGAACTTGGCCCTTACCGTGCACAAAGGAAGCACATACTCACTCAGAGACCATTGGAGGTAGCTACTGTTCCTTCACATAACTTCACTTTGGAGTATTCTGTTCTAACCCAGAGGGGATACTACCCTGATTCACCTGAGAAGGAAAACCAAGATAGTTTCTGCATTAGGAMTCAGATTCAAGGTAACCMCAGTGTCCATTTCTTTGGTGTGTATGATGGTCATGGTCAATTTGGTGGACAGTGTGCAAACTTTGTTAAGGATAGGTTAGTAGAAACATTGTCTAGTGACCCTGCATTGTTGGAGGACCCTGTTAAGGCTTACACTTCTGCATTCTTAACAACGAATTACGAACTGCATAACAGTGAYGTTGATGATTCAATGAGTGGTACCACTGCAATTACAGTGCTTGTTATTGGTGATACCCTTTATGTAGCTAATGTTGGTGACTCAAGAGCAGTGCTAGCTGTTAAGGACGGGAATAGAATTATTGCTGAGGACTTGTCCTCGGATCAGACACCGTTCCGGAGAGATGAATATGAGAGAGTGAAGCTTTCTGGGGCAAGGGTGTTGAGTGTTGATCAGGTAGAAGGGCTTAAGGATCCAAATATCCAAACTTGGGGYGACGAAGAGAGTCAGGGTGGCGATCCTCCAAGGTTGTGGGTTCAAAATGGAATGTATCCTGGAACTGCTTTYACAAGGAGTGTTGGGGATAATTTGGCAGAGACTATCGGTGTCATTGCTGTTCCTGAGGTGTCAACAGTCCAGCTTACACCGAATCATCTATTCTTTGTTGTTGCAAGTGATGGGATATTTGAGTTCCTATCAAGCCAAACTGTTGTTGACATGGCAGCAAGCTATTCAGATCCCCGTGATGCGTGTGCCGCCATTGCTGGAGAGTCATATAAACTATGGTTGGAACATGAGAACCGAACAGATGATATAACAATTATCATTGTTCAGATCAAAGGCCTGTCAAATGTTCATCTCAAGTTGGATCAGGTGACATCAATGCCAGTATGTTAA 1095 0.4438 MGCVNGKCCNRYSTPSEGGSRDYRELGPYRAQRKHILTQRPLEVATVPSHNFTLEYSVLTQRGYYPDSPEKENQDSFCIRXQIQGNXSVHFFGVYDGHGQFGGQCANFVKDRLVETLSSDPALLEDPVKAYTSAFLTTNYELHNSDVDDSMSGTTAITVLVIGDTLYVANVGDSRAVLAVKDGNRIIAEDLSSDQTPFRRDEYERVKLSGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPGTAFTRSVGDNLAETIGVIAVPEVSTVQLTPNHLFFVVASDGIFEFLSSQTVVDMAASYSDPRDACAAIAGESYKLWLEHENRTDDITIIIVQIKGLSNVHLKLDQVTSMPVC* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0190 364 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 23 355 - -
Amo20g0190 364 ProSiteProfiles PPM-type phosphatase domain profile. 55 345 IPR001932 -
Amo20g0190 364 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169
Amo20g0190 364 Pfam Protein phosphatase 2C 75 320 IPR001932 -
Amo20g0190 364 CDD PP2Cc 71 345 IPR001932 -
Amo20g0190 364 SUPERFAMILY PP2C-like 41 347 IPR036457 -
Amo20g0190 364 Gene3D - 40 347 IPR036457 -
Amo20g0190 364 SMART PP2C_4 51 343 IPR001932 -
Amo20g0190 364 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 23 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0190 Amo-Chr20 2622210 2625594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0190 1 350 PP2C-type Phosphatase Gene Family AT3G06270 73.654 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0190 - - aprc:113872580 632.098