Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0163 ATGATCTTAATGAAGAACATCATTTTCACAACTTGTCTACTCCTCCTTCTTTCTGCCTTGGCCTCATGCTCCAAATTGACCAACCAGATTTACATAGTGGAGCTTGGAGGACTAGATGAAACACAAACACAAAGAGAGCTGCATCATGATGATGATGAAGAAATAGAGAATGTTCATCGTTCTTATTTGTCTTCAGTGAAAGAAAGTGAGGAGGAAGCAAAAGCTTCGCTTCTTTACAGTTACAGGCACAGTATGAAGGGGTTTGCAGCATTGCTTAGCAGAGAAGAAGCCAAGAAGGTGTCAGAAATGGAGGGAGTGGTGCGTGTGCATAAGAGCAAGGGGATGATGTATTCATTGCATACAACAAGATCATGGGAGTTTGTTGGATTAGAAGGTCCTTTGAATCCTAATTGGGCTGATTATGAAGAATTATCTTCACATCAAAAGATCAAAAATGGACAAGATTTGTTATGCAGAGCTAACTATGGACAAAATCTCATTGTTGGAATGATTGATAGTGGGGTGTGGCTTGAATCAAAGAGCTTCAGTGATGAAGGAATGGAGCCTGTTCCACAAAAATGGAGAGGAATCTGTCAAAATGGAACTGCTTTCAACTCATCTCAATGTAATAGAAAGATCATTGGAGCACGATATTACTTACAAGGTTATGAAAGTCAATATGGCCCTCTAAATGAAGAGGAAGACTACAAGTCAGCCCGTGACAAAGATGGGCATGGAACTCACACGGCCTCCATAGTCGCAGGCCGTGCAGTTCCAAGTGCCTCGGCCATTGGGGGCTTCGCCAACGGCACAGCCTCTGGCGGAGCCCCAATGGCCCGCATTGCCATATACAAAGCATGTTGGCCCATCAAAGGGCAATCAAAACATAAAGGCAATGTATGCATAGATATTGACCTTCTTAAGGCCATGGATGATGCCATTGGTGATGGAGTTGATGTCTTAAGCGCTTCCATTGGTTACAAAACACCAATTCCTTATGAGGACGATGTGATTGGTAGGGCAGCATTACATGCAACAAAGAAGAACATTGTGGTGGTTTGTAGTGCTGGGAATAATGGCCCTTTGCCTTCAAATTTGTCAAACATTGCACCATGGATCATCACTGTTGGTGCTAGTACCGTGGATCGTTCATTTGTTGCACCAATTATGCTACAAGGTGGCACAATTATTGAGGGTAGATCAATTACTCCAGTGCACATGCCAAACAGCTTCTACCCTTTGGTGCTGGCAAGCCAAGTTGAACTTCCAGGCCTACCTACTAATGCTTCTGGGTTCTGTTTGGACAACAGCCTTGATCCTAAAAAGGTCAAGGGGAAAATAGTTGTGTGCATGCGAGGGGAAGGAGAAAACATAAGAAAGGGACTTGAAGTTGAAAGAGCTGGTGGTGTTGGTTTCATCCTAGGAAACAATGAACTACTTGGGAATACTCTATATTATGCCGCTTACTTCATTCCTTCCACTGTAGTGACCTATCAAAATGTCTTGAAACTCATTCAATACATCAATTCTTCTTCTAATCCAATGGCATATATTCTACCCGGAACAACTGTGTTGAATACCAGACCAGCACCTTTATTGGCCTCATTCTCTAGCAGGGGTCCAAATATAATTGACCCTCATATTCTCAAGCCTGACATAGTAGCTCCAGGAGTAGACATATTAGCAGCATGGACTGCAGAAGATGGGCCCACAAGAGTGACAAATCTAGATAAACGAGTTGTTAAGTACAACATCGAGTCAGGAACTTCCATGGCTTGCCCTCATGTCTCTGCTGCTGCTATTCTTCTAAAAGCTATACACCCTACTTGGACCTCTGCTGCTATAAGGTCTGCTCTCATCACCACAGCTGGGACAACAGACAACACAGGAAATCCTTTAACTGATGCAAATGGTGATCCTGCAACCCCATTTGCAATTGGTGCTGGACACTTCAACCCTGTAAAGGCAGCAGATCCTGGACTAGTTTATGATGCTTCTTACATGGACTACCTTSTCTATACTTGTAGCATTGGAGCYACTCAATACTTTCAWGTTACTTATAAATGTCCAAATTCAACATCATTGCCTGAACCAACAGATCTCAACCATCCATCCATACAAATCCACAGACTCAATGGAACTAAGAATATTAAGAGGACAGTCACCAATGTTGGTAAGAGCASCAGTGTTTACACGTTTACTGCTAAGTCATCAGAGGAGTTTTCCATCACAGCAACTCCAAATATTCTTGCATTCAATCATGTTGGACAGAAAATTAGCTTCAATATCACAGTGACAGCAAAGATGGGTCAGATTRCAAACAAGGATGGCCCAGCTAGATACTACTTTGGATGGTATGCTTGGACTAACAAGAATCATGTTGTAAGAAGCCAAGTTGCAGTGTCTTTTACCTAA 2415 0.4253 MILMKNIIFTTCLLLLLSALASCSKLTNQIYIVELGGLDETQTQRELHHDDDEEIENVHRSYLSSVKESEEEAKASLLYSYRHSMKGFAALLSREEAKKVSEMEGVVRVHKSKGMMYSLHTTRSWEFVGLEGPLNPNWADYEELSSHQKIKNGQDLLCRANYGQNLIVGMIDSGVWLESKSFSDEGMEPVPQKWRGICQNGTAFNSSQCNRKIIGARYYLQGYESQYGPLNEEEDYKSARDKDGHGTHTASIVAGRAVPSASAIGGFANGTASGGAPMARIAIYKACWPIKGQSKHKGNVCIDIDLLKAMDDAIGDGVDVLSASIGYKTPIPYEDDVIGRAALHATKKNIVVVCSAGNNGPLPSNLSNIAPWIITVGASTVDRSFVAPIMLQGGTIIEGRSITPVHMPNSFYPLVLASQVELPGLPTNASGFCLDNSLDPKKVKGKIVVCMRGEGENIRKGLEVERAGGVGFILGNNELLGNTLYYAAYFIPSTVVTYQNVLKLIQYINSSSNPMAYILPGTTVLNTRPAPLLASFSSRGPNIIDPHILKPDIVAPGVDILAAWTAEDGPTRVTNLDKRVVKYNIESGTSMACPHVSAAAILLKAIHPTWTSAAIRSALITTAGTTDNTGNPLTDANGDPATPFAIGAGHFNPVKAADPGLVYDASYMDYLXYTCSIGATQYFXVTYKCPNSTSLPEPTDLNHPSIQIHRLNGTKNIKRTVTNVGKSXSVYTFTAKSSEEFSITATPNILAFNHVGQKISFNITVTAKMGQIXNKDGPARYYFGWYAWTNKNHVVRSQVAVSFT* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0163 804 CDD Peptidases_S8_3 117 623 IPR034197 -
Amo20g0163 804 Gene3D - 382 525 - -
Amo20g0163 804 SUPERFAMILY Subtilisin-like 160 658 IPR036852 GO:0004252|GO:0006508
Amo20g0163 804 Gene3D Peptidase S8/S53 domain 166 670 IPR036852 GO:0004252|GO:0006508
Amo20g0163 804 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.6 24 801 - -
Amo20g0163 804 CDD PA_subtilisin_like 394 518 - -
Amo20g0163 804 Pfam Fibronectin type-III domain 700 801 IPR041469 -
Amo20g0163 804 Pfam PA domain 413 503 IPR003137 -
Amo20g0163 804 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 120 IPR037045 -
Amo20g0163 804 ProSiteProfiles Serine proteases, subtilase domain profile. 124 657 - -
Amo20g0163 804 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 24 801 IPR045051 -
Amo20g0163 804 Gene3D - 674 803 - -
Amo20g0163 804 Pfam Peptidase inhibitor I9 31 112 IPR010259 -
Amo20g0163 804 ProSitePatterns Serine proteases, subtilase family, serine active site. 588 598 IPR023828 -
Amo20g0163 804 Pfam Subtilase family 163 649 IPR000209 GO:0006508|GO:0008236
Amo20g0163 804 PRINTS Subtilisin serine protease family (S8) signature 241 254 IPR015500 -
Amo20g0163 804 PRINTS Subtilisin serine protease family (S8) signature 163 182 IPR015500 -
Amo20g0163 804 PRINTS Subtilisin serine protease family (S8) signature 587 603 IPR015500 -
Amo20g0163 804 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0163 Amo-Chr20 1978901 1986891 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0163 4 803 Subtilisin-like Serine Gene Family AT5G45650 52.612 0.0 816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0163 20 1978901 1986891 Amo20g0163 20 1978901 1986891 ECH