Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0150 ATGGTCATGGAGAAAAGAGAGAGGCCATTGAAAATGGCAAGGTCGTTTACTAGTTATATGATATTTGATTTCACATTTCATGGTGTCTTCCTACTTCCTCTTCTTTTATTAGTACTTCAGTTTTCATCTCAGCTTGCAAACTGTGGCAGCATAGTTAAGTATCTTCCAGGGTTCCAAGGACCCCTTCCTTTTCTGCTTGAAACTGGATATATTGGGGTGGGTGAAGATGATGATGTGCAGAGTTTCTACTATTTCATTGAGTCAGAGAACAATCCTAAGGTGGATCCTCTCATGCTATGGCTCACTGGTGGTCCTGGCTGCTCTGCTTTCTCTGGCCTTGTCTTTGAAATTGGTCCACTTACATTTAAAAATGAAGAATATAATGGGAGTCTGCCTAATTTGTATTTGAAGCCACACTCTTGGACAAAGGTAAGCAACATTATATTTGTAGATTTGCCTGTTTTAACAGGCTTTTCTTATGCCAGAACAGATTCTGCTGCTCAACGAAGCGATTGTTTACTGGTTAATCAAACTCATCAATTTCTTAGAAAGTGGCTGATTGAACATCCAAAATTTCTATCACATGAAATTTACATTGGTGGTGATTCATACTCTGGTATTCCTATCCCAGCAGTTGTTCAAGAAATTTCACAAGGAAATGAAGAAGGGGTCCAACCATGGATTAATCTCCAGGGATACCTGCTGGGAAATCCTGTAACAACTCGAACGGAAAAGAATTATAAAATCCCATTTGCTCATGGAATGGCACTTATTTCTGATGAACTATACAATTCACTGCAAAAAAATTGTAAAGGAGACTACATAAATATAGACACAGAAAATGTGTTATGTTCAAGAGACATTGTTTCCTTCAACAAGGTACACACTGCATCCATTGTTTTCTTGCTATCCAAGTTTTGTCAGCAGAGACTTAATTCAGCACAGATTTTGGATCCGTTATGCGAGTACATCACTTCGCCTAAGCCGGAGAAATTTTCTTGGAGGAGAGCTCTAACTGAGAACAAGTATTCCAGGAGTTTCCTTGCTCCTCCCCTGACATTGCCACCATTAAGCTGCCGTAGTTATGCATACTTCCTTTGCACTTATTGGGCTAATGATGATAGTGTTCACAATGCTCTCCACATAAGAAAGGGAAGCATCGGCGAATGGCATCGCTGTACATGGAACATACCTCACAAGCTGGAAATCTATAACAGCTTTGAGTATCATGTAAATCTCAGTCAAAAAGGCTATCGTTCACTGATATACAGTGGTGATCATGACATCACAGTTCCTTTCTTGTCAACTCAAGCATGGATAAGATCCTTAAACTACTCCATTGTAGAAGACTGGAGACAATGGCAAACAAATGGACAAGTAGCAGGATACACAAGGACTTACTCTAATAGGATGACATTTGCAACTGTGAAGGCAAGCCTTGTGAATTGTGATTCAAAGTTGTCATATAGATTTTCCTTTATTGGTATCTTATATGAATCATTAACAACTTTGCATTTGCAGGGTGGTGGCCACACAGCACCAGAGTTCAAGCCTGAAGAATGCTTTGCTATGTACAGCAGTGACAATCATGGGGTCCTACTTCTCCTTCTTTTGTTACTACTACAGATTTCATCTCAACTTGTAAACTGTGGCAGCATAGTGAAGTACCTTCCTGGGTTCCAGGGACCCCTTCCTTTTGTTCTTAAAACTGGGGAGCACGTAACATTATGCACATCCTCAAAGAAAAAAGAGAGCCAACTAAACATGTCAATATTTTCCTCAACTTGTTTAACTGATCCACGTTTCATTTGCCATGGATTCCTACTTCCCATTCTTCTATTGCTACTGCAGATTTCATCTCAACTTGGAGATTGTGGTACCATTGTTAAGTACCTTCCAGGATTCCAGGGACCACTTCCTTTTCTGCTTGAAACTGGTTTCTACTATTTCATTGAGTCAGAGAACAATCCAAGAGAAGATCCTCTCATGCTCTGGCTCACTGGTGGTCCTGGCTGCTCTGCTTTTTCTGGCCTTGTCTATGAAATAGGACCACTTGCATTTCAAGTTGATGAATATGATGGCGGCCTCCCTAGTTTGGTGTATAAGCCAAACTCATGGACTAAGGTAAGTAGCATTGTATTTGTAGATGTGCCTGTTAATACTGGCTTTTCATATGCTAGAACGGAATTCGCTTCTCAACGGAGCGACTCACTGTCAGTCAGTCAAGCCCATCAATTTTTGAGGAAGTGGATAATGGATCATCCAGAATTTCTCAAAAACAAAGTTTACATTGCTGGTGATTCATATTCTGGTATGCATGTTCCTATAATTGCTGACGAAATTTCAAAAGCAAATGAACGAGGCCTCCAACCATGGATAAATCTCCAGGGATACCTGATGGGGAATCCTGTAATAAATCGAAATGAAAAAAATTATGCAATCCCATTTGCTCATGGGATGGGACTCATTTCTGATGAACTATACAAGTCACTGCAAAAACATTGTAAAGGAGAATATGTAAATGTAGACATGAGAAATGTTTTGTGTTCAAGAGATGTCAACTCCTTTGACGAGATCACATCAGGTATTGATTCAGCCAACATTTTGGAGCCCAACTGTGAGTTCGCCACACAGAAGCCATTGGAATCTTCTTGGAGGAGATCACTAACAGATAACTATCCTGCGAAGTTCAAAGATACTCATCTCAGGTTACCATCCAGGAATTGCCGGACCTATGGATATCTCCTTAGTGCCTATTGGGCCAATGATAACAAAGTCCGAAATGCCCTTAACGTGCGGAAGGGAACTAAAAAGAAATGGAAACGCTGCACCAAAAATATGCCTTACAAGTATGATATCTCTAGCAACTTTCCATATCAAGTAAATCTCAGCAGAAAAGGCTATCGTTCCTTGATTTACAGTGGGGATCATGACATGGTTGTTCCTTTCTTGGCAACTCAAGCATGGATAAGATCTTTAAACTACTCCATTGTCGACGATTGGAGGCCATGGTATACTAATGGACAAGTTGCAGGGTATTCATTCCTTTAA 3051 0.4028 MVMEKRERPLKMARSFTSYMIFDFTFHGVFLLPLLLLVLQFSSQLANCGSIVKYLPGFQGPLPFLLETGYIGVGEDDDVQSFYYFIESENNPKVDPLMLWLTGGPGCSAFSGLVFEIGPLTFKNEEYNGSLPNLYLKPHSWTKVSNIIFVDLPVLTGFSYARTDSAAQRSDCLLVNQTHQFLRKWLIEHPKFLSHEIYIGGDSYSGIPIPAVVQEISQGNEEGVQPWINLQGYLLGNPVTTRTEKNYKIPFAHGMALISDELYNSLQKNCKGDYINIDTENVLCSRDIVSFNKVHTASIVFLLSKFCQQRLNSAQILDPLCEYITSPKPEKFSWRRALTENKYSRSFLAPPLTLPPLSCRSYAYFLCTYWANDDSVHNALHIRKGSIGEWHRCTWNIPHKLEIYNSFEYHVNLSQKGYRSLIYSGDHDITVPFLSTQAWIRSLNYSIVEDWRQWQTNGQVAGYTRTYSNRMTFATVKASLVNCDSKLSYRFSFIGILYESLTTLHLQGGGHTAPEFKPEECFAMYSSDNHGVLLLLLLLLLQISSQLVNCGSIVKYLPGFQGPLPFVLKTGEHVTLCTSSKKKESQLNMSIFSSTCLTDPRFICHGFLLPILLLLLQISSQLGDCGTIVKYLPGFQGPLPFLLETGFYYFIESENNPREDPLMLWLTGGPGCSAFSGLVYEIGPLAFQVDEYDGGLPSLVYKPNSWTKVSSIVFVDVPVNTGFSYARTEFASQRSDSLSVSQAHQFLRKWIMDHPEFLKNKVYIAGDSYSGMHVPIIADEISKANERGLQPWINLQGYLMGNPVINRNEKNYAIPFAHGMGLISDELYKSLQKHCKGEYVNVDMRNVLCSRDVNSFDEITSGIDSANILEPNCEFATQKPLESSWRRSLTDNYPAKFKDTHLRLPSRNCRTYGYLLSAYWANDNKVRNALNVRKGTKKKWKRCTKNMPYKYDISSNFPYQVNLSRKGYRSLIYSGDHDMVVPFLATQAWIRSLNYSIVDDWRPWYTNGQVAGYSFL* 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0150 1016 Gene3D - 359 529 - -
Amo20g0150 1016 Gene3D alpha/beta hydrolase 635 1014 IPR029058 -
Amo20g0150 1016 Gene3D alpha/beta hydrolase 48 318 IPR029058 -
Amo20g0150 1016 Pfam Serine carboxypeptidase 56 478 IPR001563 GO:0004185|GO:0006508
Amo20g0150 1016 Pfam Serine carboxypeptidase 647 1013 IPR001563 GO:0004185|GO:0006508
Amo20g0150 1016 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 606 1014 - -
Amo20g0150 1016 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 531 571 - -
Amo20g0150 1016 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 29 478 - -
Amo20g0150 1016 SUPERFAMILY alpha/beta-Hydrolases 629 1014 IPR029058 -
Amo20g0150 1016 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 149 IPR001563 GO:0004185|GO:0006508
Amo20g0150 1016 PRINTS Carboxypeptidase C serine protease (S10) family signature 185 210 IPR001563 GO:0004185|GO:0006508
Amo20g0150 1016 PRINTS Carboxypeptidase C serine protease (S10) family signature 501 514 IPR001563 GO:0004185|GO:0006508
Amo20g0150 1016 PRINTS Carboxypeptidase C serine protease (S10) family signature 150 160 IPR001563 GO:0004185|GO:0006508
Amo20g0150 1016 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 606 1014 IPR001563 GO:0004185|GO:0006508
Amo20g0150 1016 SUPERFAMILY alpha/beta-Hydrolases 52 477 IPR029058 -
Amo20g0150 1016 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 531 571 IPR001563 GO:0004185|GO:0006508
Amo20g0150 1016 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 29 478 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0150 Amo-Chr20 1753801 1787325 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0150 46 75 Calmodulin-binding Proteins AT2G22960 73.333 5.34e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0150 K16296 - zju:107433655 909.827