Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0127 ATGGCAAGGTCGTTTACTAGTTATATGATATTTGATTTCACATTTCATGGTGTCTTCCTACTTCCCCTTCTTTTATTAGTACTTCAGTTTTCATCTCAGCTTGCAAACTGTGGCACCATAGTTAAGTATCTTCCAGGATTCCAAGGACCCCTTCCTTTTCTGCTTGAAACTGGATATATTGGGGTGGGTGAAAATGATGATGTGCAGAGTTTCTACTATTTCATTGAGTCAGAGAACAATCCTAAGGTGGATCCTCTCATGCTATGGCTCACTGGTCCTCTTACATTTAAAAATGAAGAATATAATGGGAGTCTGCCTAATTTGTATTTGAAGCCACACTCTTGGACAAAGGTAAGCAACATTATATTTGTAGATTTGCCTGTTTTTACAGGCTTTTCTTATGCCAGAACAGATTCTGCTGCTCAACGAAGCGATTGCTTACTTGTTAATCAAACTCATCAATTCCTTAGGAAGTGGCTGATTGAACATCGAAAATTTCTATCACATGAAATTTACATTGGTGGTGATTCATATTCTGGTATTCCTATCCCAGCAGTTGTTCAAGAAATTTCACAAGGAAATGAAGAAGGGGTCCAACCGTGGATTAATCTCCAGGGATACCTGCTGGGAAATCCTGTAACAACTCGAACCGAAAAGAACTATAAAATCCCATTTGCTCATGGAATGGCACTTATTTCTGATGAACTATACAATTCACTGCAAACAAATTGTAAAGGAGACTACATAAATATAGACACAGAAAATGTGTTATGTTCAAGAGACATTGCTTCCTTTAACAAGGTACACATTGCATCCATTGTTTTCTTGCTATCCAAGTTTTGTCAGCAGAGACTTAATTCAGCACAGATTTTGGATCCGTTATGCGAGTACATCACTTCGCCTAAGCCGGAGAAATTTTCTTGGAGGAGAGCTCTAACTGAGCACAAGTATTCCAGGAGTTTCCTTGCTCCTCCCCTGACATTGCCACCATTAAGCTGCCGTAGTTATGCATACTTCCTTTGCACTTATTGGGCTAATGATGATAGTGTTCACAATGCTCTCCACATAAGAAAGGGAAGCATCGACGAATGGCATCGTTGTACATGGAACATACCTCACAAGCTGGAAATCTATAACAGCTTTGAGTATCATGTAAATCTCAGTCGAAAAGGCTATCGTTCACTGATATACAGTGGCGATCATGACATGACAGTTCCTTTCTTATCGACTCAAGCATGGATAAGATCCTTAAACTACTCCATTGTAGAAGACTGGAGACAATGGCAAACAAATGGACAAGTAGCAGGATACACAAGGACTTACTCTAATAGGATGACATTTGCAACTGTGAAGGCAAGCCTTGGTGGTGGCCACACAGCACCAGAGTTCAAGCCTGAAGAATATTTCATTCATCATGTTCTTCTTTCTGGTACTCTAATCATTTTCAAAGAATAA 1455 0.3952 MARSFTSYMIFDFTFHGVFLLPLLLLVLQFSSQLANCGTIVKYLPGFQGPLPFLLETGYIGVGENDDVQSFYYFIESENNPKVDPLMLWLTGPLTFKNEEYNGSLPNLYLKPHSWTKVSNIIFVDLPVFTGFSYARTDSAAQRSDCLLVNQTHQFLRKWLIEHRKFLSHEIYIGGDSYSGIPIPAVVQEISQGNEEGVQPWINLQGYLLGNPVTTRTEKNYKIPFAHGMALISDELYNSLQTNCKGDYINIDTENVLCSRDIASFNKVHIASIVFLLSKFCQQRLNSAQILDPLCEYITSPKPEKFSWRRALTEHKYSRSFLAPPLTLPPLSCRSYAYFLCTYWANDDSVHNALHIRKGSIDEWHRCTWNIPHKLEIYNSFEYHVNLSRKGYRSLIYSGDHDMTVPFLSTQAWIRSLNYSIVEDWRQWQTNGQVAGYTRTYSNRMTFATVKASLGGGHTAPEFKPEEYFIHHVLLSGTLIIFKE* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0127 484 SUPERFAMILY alpha/beta-Hydrolases 41 470 IPR029058 -
Amo20g0127 484 Pfam Serine carboxypeptidase 45 469 IPR001563 GO:0004185|GO:0006508
Amo20g0127 484 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 18 469 - -
Amo20g0127 484 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 18 469 IPR001563 GO:0004185|GO:0006508
Amo20g0127 484 Gene3D alpha/beta hydrolase 51 475 IPR029058 -
Amo20g0127 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Amo20g0127 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 448 461 IPR001563 GO:0004185|GO:0006508
Amo20g0127 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Amo20g0127 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 184 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0127 Amo-Chr20 1509410 1513915 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0127 35 64 Calmodulin-binding Proteins AT2G22960 70.000 4.08e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0127 K16296 - gmx:100792006 659.448