Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0126 ATGGTGCGTTTCCATTACGCCAATCAAAGTACGGATAACATAACTCTTTTCTCCTTGAAAGCTCAAGTTGCATTTACTTTGATACCCCTTCTGAGTTCTGAGTATCACAACTTCATTATTATTTATAGGGAGCACGTAACATTATGCACATCCTCAAAGAAAAAAGAGAGCCAACTAAACATGTCAATATTTTCCTCAACTTGTTTAACTGATCCACGTTTCATTTGCCATGGATTCCTACTTCCCATTCTTCTATTGCTACTGCAGATTTCATCTCAACTTGGAGATTGTGGTACCATTGTTAAGTACCTTCCAGGATTCCAGGGACCACTTCCTTTTCTGCTTGAAACTGGGTATATAGGAGTAGGAGAAAATGATGATGTGCAGAGTTTCTACTATTTCATTGAGTCAGAGAACAATCCAAGAGAAGATCCTCTCATGCTCTGGCTCACTGGACCACTTGCATTTCAAGTTGATGAATATGATGGCGGCCTCCCTAGTTTGGTGTATAAGCCAAACTCATGGACTAAGGTAAGTAGCATTGTATTTGTAGATGTGCCTGTTAATACTGGCTTTTCATATGCTAGAACGGAATTCGCTTCTCAACGGAGCGACTCACTGTCAGTCAGTCAAGCCCATCAATTTTTGAGGAAGTGGATAATGGATCATCCAGAATTTCTCAAAAACAAAGTTTACATTGCTGGTGATTCATATTCTGGTATGCATGTTCCTATAATTGCTGACGAAATTTCAAAAGCAAATGAACGAGGCCTCCAACCATGGATAAATCTGCAGGGATACCTGATGGGGAATCCTATAATAGATCGAAATCAAAAAAATTATGTAATCCCATTTGCTCATGGGATGGGACTCATTTCTGATGAACTATACAAGTCACTGCAAAAACATTGTAAAGGAGAATATGTAAATGTAGACATGAGAAATGTTTTGTGTTCAAGAGATCTCAACTCCTTTGATGAGATCACATCAGGTATTGATTCAGCCAACATTTTGGAGCCCAACTGTGAGTTCGCCACACAGAAGCCATTGGAATCTTCTTGGAGGAGATCACTAACAGATAACTATCCTGCGAAGTTCAAAGATACTCATCTCAGGTTACCATCCAGGAATTGCCGGGGAACTAAAAAGAAATGGAAACGCTGCACCAAAAATATGCCTTACAAGTATGATATCTCTAGCAACTTTCCATATCAAGTAAATCTCAGCAGAAAAGGCTATCGTTCCTTGATTTACAGTGGGGATCATGACATGGTTGTTCCTTTCTTGGCAACTCAAGCATGGATAAGATCGTTAAACTACTCCATTGTCGACGATTGGAGGCCATGGTATACTAATGGACAAGTTGCAGGATACACAAGGACTTACTCCAATGCAATGACATTTGCAACTGTCAAGGGTGGAGGACACACAGCACCAGAATACAAGCCTCAAGAATGCCTTCACATGTATAGTAGGTGGATCTCTGAGAGACCCTTTTAG 1500 0.402 MVRFHYANQSTDNITLFSLKAQVAFTLIPLLSSEYHNFIIIYREHVTLCTSSKKKESQLNMSIFSSTCLTDPRFICHGFLLPILLLLLQISSQLGDCGTIVKYLPGFQGPLPFLLETGYIGVGENDDVQSFYYFIESENNPREDPLMLWLTGPLAFQVDEYDGGLPSLVYKPNSWTKVSSIVFVDVPVNTGFSYARTEFASQRSDSLSVSQAHQFLRKWIMDHPEFLKNKVYIAGDSYSGMHVPIIADEISKANERGLQPWINLQGYLMGNPIIDRNQKNYVIPFAHGMGLISDELYKSLQKHCKGEYVNVDMRNVLCSRDLNSFDEITSGIDSANILEPNCEFATQKPLESSWRRSLTDNYPAKFKDTHLRLPSRNCRGTKKKWKRCTKNMPYKYDISSNFPYQVNLSRKGYRSLIYSGDHDMVVPFLATQAWIRSLNYSIVDDWRPWYTNGQVAGYTRTYSNAMTFATVKGGGHTAPEYKPQECLHMYSRWISERPF* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0126 499 SUPERFAMILY alpha/beta-Hydrolases 101 498 IPR029058 -
Amo20g0126 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 466 479 IPR001563 GO:0004185|GO:0006508
Amo20g0126 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 183 IPR001563 GO:0004185|GO:0006508
Amo20g0126 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 219 244 IPR001563 GO:0004185|GO:0006508
Amo20g0126 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 184 194 IPR001563 GO:0004185|GO:0006508
Amo20g0126 499 Pfam Serine carboxypeptidase 105 495 IPR001563 GO:0004185|GO:0006508
Amo20g0126 499 Gene3D - 369 499 - -
Amo20g0126 499 Gene3D alpha/beta hydrolase 98 351 IPR029058 -
Amo20g0126 499 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 78 498 IPR001563 GO:0004185|GO:0006508
Amo20g0126 499 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 78 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0126 Amo-Chr20 1479638 1502434 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0126 368 499 Calmodulin-binding Proteins AT2G22960 61.364 3.21e-51 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0126 K16296 - gmx:100794342 603.979