Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0095 ATGATTGGTGTAATGCTACTGTTGTGTATGTCAGTGACTTCTTATGCACTAAGATACAAGGTTGGGGATTCACGTGGTTGGTCCTTCAACGTTAGTAACTGGCCTTATGGAAAGACTTTCATGGCTGGTGATGTACTTGAATTCAATTACATGTTTGGGATGCACAACGTGATGGAAGTAGACAAGTCTTTTTTCGAGCTATGCATTCCAATTCCAAAGATTGGAAGTGAATTTGGAGACACAGTACACTGGTCAGGAAATGATCAAATTCAGCTTCGCTCAGGACAGAGCTACTTCATTTGTAGTTTTCTTGGTCATTGTCAGCGTGGCATGAAAATTGCCGTCAATGCTGTCTAA 357 0.4118 MIGVMLLLCMSVTSYALRYKVGDSRGWSFNVSNWPYGKTFMAGDVLEFNYMFGMHNVMEVDKSFFELCIPIPKIGSEFGDTVHWSGNDQIQLRSGQSYFICSFLGHCQRGMKIAVNAV* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0095 118 CDD Plantacyanin 19 117 IPR041844 -
Amo20g0095 118 Pfam Plastocyanin-like domain 30 111 IPR003245 GO:0009055
Amo20g0095 118 Gene3D - 17 118 IPR008972 -
Amo20g0095 118 PANTHER BASIC BLUE-LIKE PROTEIN 2 116 - -
Amo20g0095 118 ProSiteProfiles Phytocyanin domain profile. 17 118 IPR003245 GO:0009055
Amo20g0095 118 PANTHER BLUE COPPER PROTEIN 2 116 IPR039391 GO:0009055
Amo20g0095 118 SUPERFAMILY Cupredoxins 19 117 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0095 Amo-Chr20 1166320 1166756 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0095 4 118 Phytocyanin Superfamily AT1G17800 36.290 1.14e-17 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0095 - - ahf:112714333 250.751