Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0085 ATGCAGTGTTATGATCAAAGTCTTGAGCTCCAAGCACCAAGAGGAACCTCACAGATCAATGTTTGCTTCGATGTAAACATCGATGGCATTCTTGAGGTCACGGCTGAAGACAAAAGTTCGAGGGTGAAGAAAACGATCAAGATCAACCACAGGAATGGAAGGTTGAGACCAGAAGAGTTGAAGAGAATGGTGAGAGATACAGAGAAGTTTAAGGAAGATGATGAGGAAGTAAAGAAGAAGGAGAAGGCAAAGAACTCGCTTGAAAACTATGCATATGAAATGAAGTAA 288 0.4132 MQCYDQSLELQAPRGTSQINVCFDVNIDGILEVTAEDKSSRVKKTIKINHRNGRLRPEELKRMVRDTEKFKEDDEEVKKKEKAKNSLENYAYEMK* 96
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0085 95 MobiDBLite consensus disorder prediction 71 95 - -
Amo20g0085 95 PANTHER HEAT SHOCK 70 KDA PROTEIN 5 11 94 - -
Amo20g0085 95 PANTHER HEAT SHOCK PROTEIN 70KDA 11 94 IPR013126 GO:0005524|GO:0140662
Amo20g0085 95 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 12 88 IPR029047 -
Amo20g0085 95 Pfam Hsp70 protein 12 95 IPR013126 GO:0005524|GO:0140662
Amo20g0085 95 MobiDBLite consensus disorder prediction 71 88 - -
Amo20g0085 95 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 6 95 IPR029047 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Amo20g0085 Amo-Chr20 1106857 1107192 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0085 12 95 Calmodulin-binding Proteins AT1G16030 60.714 7.54e-30 108
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0085 K03283 - ahf:112718411 141.739