Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0031 ATGAGTAGCTTACAATGGAAGAAACTGAAAGTCTTGGGAGTGGGTTCTTATGGCACTGTTTATCTTGCAATTGTTGTTGATACACAAACATCGTATCAGAGCTTCATTGCTGAGAAGAGCTCCATTCCCAGCGGTGGTTGCGAAGAAATCATTCGATGCTTTGGCACTGAGATCACGGTAAAGCACGGACATTACTTTTACAATCTTCTGTTGGAGTATGCTCCTCACGGTTCTTTGGATGACTTGATCCACAAGAAACCTCTCCCGGAGACCGACGTGAGCGTCTATGCACGCATGATTGTTAAAGGGCTTTCGCATATTCATCGCAAAGGAATCGTCCACTGTAACCTCAATCCGGAGAACATTCTTCTGTTTCCTTCATTGAAGAAAGAGAGTGCATACTATCAATTGAAGATTGCGGATTTTAGATTATCTAAGACCAAAGAGGAGAAAGCAGAGTTTGAGACATTTTCCGGTCATATTGATGCTCCGATCGATATATGGGCACTTGGTTGCATAGTGATTGAAATGTTGACTGGATTGCTTGCATGGGGTGAGAGATTTTTGCGTACTGAAGAGTATTTGAGGTTCTTCGTTGAGTATCTTGAACTATCACCCAAGAAGCCGAAAGGAATCAATGATCCTAGCAAGAAGTGGACTGCTGAGATGCTTCTTGATCATCCTTTGTTTTATATCACACTTTTTCATTCATATCATCCTTTCCTTTATGAGCCTGATGGCTATGCCGTAAGATTTCTTGGGTCAGGCCATCTTCTTCTCCTTGACAGCTTTGTCGAAAGGGAGTTGGAGTCAGGTGTATATGATCAAATAAATAATTGA 840 0.419 MSSLQWKKLKVLGVGSYGTVYLAIVVDTQTSYQSFIAEKSSIPSGGCEEIIRCFGTEITVKHGHYFYNLLLEYAPHGSLDDLIHKKPLPETDVSVYARMIVKGLSHIHRKGIVHCNLNPENILLFPSLKKESAYYQLKIADFRLSKTKEEKAEFETFSGHIDAPIDIWALGCIVIEMLTGLLAWGERFLRTEEYLRFFVEYLELSPKKPKGINDPSKKWTAEMLLDHPLFYITLFHSYHPFLYEPDGYAVRFLGSGHLLLLDSFVERELESGVYDQINN* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0031 279 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 5 232 - -
Amo20g0031 279 Gene3D Transferase(Phosphotransferase) domain 1 3 242 - -
Amo20g0031 279 Pfam Protein kinase domain 7 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo20g0031 279 SUPERFAMILY Protein kinase-like (PK-like) 6 240 IPR011009 -
Amo20g0031 279 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 5 232 - -
Amo20g0031 279 ProSiteProfiles Protein kinase domain profile. 6 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0031 Amo-Chr20 304232 305470 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0031 4 232 MAP Kinase Kinase Kinase AT4G36950 34.672 8.05e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Amo20g0031 Pkinase 2.7e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0031 - - aip:107610915 352.443