Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4577 ATGCCGGAGGAAACCACGTCGATCGACTATGTCATGGAGGCAGCCTCGGGGCCACACTTCTCCGGTCTCCGCCTCGACGGCCTCCTCTCCTCTCCGCCCTCCTCCTCTACCTCCTCCCCCGCCCACCGCTTCTCCTCCGCACCCGATCTTTCCTCCGCCCTATCCCCCGATTCTCTCAACCAGCCCTTCGTTATTGGTGTTTCTGGAGGTACTGCTTCTGGGAAGACCACTGTCTGTGACATGATCATTCAGCAGCTTCATGATCACCGCGTTGTTCTTGTCAATCAGGATTCATTTTACCGTGGTTTGAGACCTGAAGAGTTGGAAAGAGTTCACGAGTACAATTTTGATCATCCAGATGCCTTCGACACCGAACAGCTATTAGAGTGCATGAGAAAGCTTATTGCTGGCCAGAGTGTGCAGGTGCCAATTTATGACTTTAAGAAGCACCAACGGTGTTCAGATAGTTTTCGGCAGGTCAATGCTTCTGATGTCATTATATTGGAGGGAATTCTTGTATTCCATGATCAGGATGTCCGGGATTTAATGAACATGAAGATCTTTGTTGACACAGATGCTGATGTGAGACTAGCTCGTAGGATTAGACGTGACACAGTGGAGCGAGGGAGGGACATAAACTCTGTTCTTGAACAGTACGCAAAGTTTGTTAAGCCTGCCTTTGATGATTTTGTTCTACCGTCAAAGAAGTATGCTGATGTGATCATTCCTCGGGGAGGTGATAATCATGTTGCCATTGATTTGATCGTGCAACATATCCGCACAAAGCTTGGTCAACATGATCTGTGCAAAATATATCCAAATGTTTATGTTATTCAATCAACATTCCAGATAAGGGGGATGCATACATTGATTCGTGACAAAGACATATCAAAGCATGATTTCGTATTTTATTCTGATCGGCTTATTCGTCTGGTTGTTGAGCATGGTCTTGGTCATCTCCCATTCACCGAAAAGCAAGTCGTCACTCCAACAGGATCTGTCTACACTGGTGTTGATTTCTGCAAGAAACTATGTGGTGTTTCAATTGTTCGAAGTGGTGAGAGCATGGAGAATGCACTTCGTGCATGTTGTAAGGGCATTAAAATAGGGAAAATTCTGATTCATCGGGATGGAGACGATGGACAACAGCTTATATATGAGAAGCTTCCCAAGGATATTTCAGAACGGCATGTCTTGCTTCTCGATCCTGTCCTTGCTACAGGTAACTCCGCCAACCAAGCAATTGAGTTACTCATTCAGAAAGGAGTTCCAGAGTCCCACATTATATTCCTGAATCTCATTTCTGCTCCTGAGGGGATCCATTGTGTGTGTAAACGGTTTCCCTCACTGAAAATTGTCACATCTGAGATTGATGCCGCCTTAAACGATGAGTTTCGGGTTATCCCTGGATTGGGCGAGTTTGGGGATCGCTACTTTGGTACAGATGATTGA 1452 0.4587 MPEETTSIDYVMEAASGPHFSGLRLDGLLSSPPSSSTSSPAHRFSSAPDLSSALSPDSLNQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLRPEELERVHEYNFDHPDAFDTEQLLECMRKLIAGQSVQVPIYDFKKHQRCSDSFRQVNASDVIILEGILVFHDQDVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDKDISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSVYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDDGQQLIYEKLPKDISERHVLLLDPVLATGNSANQAIELLIQKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDAALNDEFRVIPGLGEFGDRYFGTDD* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4577 483 SUPERFAMILY PRTase-like 265 482 IPR029057 -
Amo19g4577 483 Gene3D - 266 481 IPR029057 -
Amo19g4577 483 Pfam Uracil phosphoribosyltransferase 280 481 - -
Amo19g4577 483 Gene3D - 58 265 IPR027417 -
Amo19g4577 483 CDD UMPK 64 262 IPR000764 -
Amo19g4577 483 Pfam Phosphoribulokinase / Uridine kinase family 64 250 IPR006083 GO:0005524|GO:0016301
Amo19g4577 483 CDD PRTases_typeI 339 454 IPR000836 -
Amo19g4577 483 PANTHER URIDINE KINASE 16 480 - -
Amo19g4577 483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 255 IPR027417 -
Amo19g4577 483 MobiDBLite consensus disorder prediction 25 51 - -
Amo19g4577 483 MobiDBLite consensus disorder prediction 28 51 - -
Amo19g4577 483 TIGRFAM udk: uridine kinase 62 262 IPR000764 -
Amo19g4577 483 PANTHER URIDINE KINASE-LIKE PROTEIN 2, CHLOROPLASTIC 16 480 IPR029930 GO:0004849|GO:0044206
Amo19g4577 483 PRINTS Uridine kinase signature 62 79 - -
Amo19g4577 483 PRINTS Uridine kinase signature 92 103 - -
Amo19g4577 483 PRINTS Uridine kinase signature 137 152 - -
Amo19g4577 483 PRINTS Uridine kinase signature 194 204 - -
Amo19g4577 483 PRINTS Uridine kinase signature 208 219 - -
Amo19g4577 483 PRINTS Uridine kinase signature 230 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4577 Amo-Chr19 163737684 163744494 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4577 1 483 PRT Gene Family AT5G40870 86.335 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4577 K00876 - gmx:100780005 855.514