Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4544 ATGTTGCTGGAGAACTTCAAGGAACAGCTTGCTTTGTCTGTGAGAAGCATCCAGTGGAGCTATGCAATATTCTGGTCTACTTCATCTACCCAACCCTTGGTGTTGAGTTGGGGGGAAGGATATTACAATGGAGACATTAAGACAAGGAAGACAAGTCAAGGAGTGGAACTCAATTTTGATCAGATAGGGTTGCAGCGGAGTGAGCAGCTTCGAGAGTTATACAAGTCCCTCAAAGCTGTAGAAGCCAGCCCTCAAACCAAAAGGCGTTCAGCAGCACTGTCTCCGGAGGATCTCACAGATACAGAATGGAGTTGA 315 0.4667 MLLENFKEQLALSVRSIQWSYAIFWSTSSTQPLVLSWGEGYYNGDIKTRKTSQGVELNFDQIGLQRSEQLRELYKSLKAVEASPQTKRRSAALSPEDLTDTEWS* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4544 104 PANTHER TRANSCRIPTION FACTOR TT8 5 103 - -
Amo19g4544 104 MobiDBLite consensus disorder prediction 81 104 - -
Amo19g4544 104 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 7 103 IPR025610 -
Amo19g4544 104 PANTHER TRANSCRIPTION FACTOR EGL1 5 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4544 Amo-Chr19 162808563 162812096 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4544 4 103 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 64.151 2.83e-40 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4544 - - aip:110267647 200.675