Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4540 ATGGCTTCTTCTCTCACGGGAAAATCTAGGGAGGTTTCATCCCGGATCCCTGACAGTCGCGAACCTCGGCCAAGTGTTGGTGGGAGGAATTTCAAGGTCCTTATGGAAAATGAACGGATTAAAGTTGGCAATGTGCTCATGAAATCTGTGAGAGAAGCATGTGCAACTTCGAGAACGAGTGCTACAGTAGCTGGTAATCCTAAGGGAGGCTTCAAAAGTATGGATAAAAGCAATAGCAAATATGTTACTTCTGCAAATAAAAATGTGAGAAAGGCATTGGCTGATGTTAGTAATGTTCAAGGAAACTCTGCAACAAATATTGGACGTGACAGCTCCAAAATGAAGGGTTTAGCAGGTTCAAACATTAAAAAAGGGGGTGGTATCACCTTGAGGAAATCCTTCACGGGAATAATGCAAAGAAATAGAAGCAATGATGTCCAGTCAGATGCTCCAAAGAAAGGCATAGATGTGAGACCAGCTTCAAAGGATCAGAAGTATAATTCACATGGAGGCCCATCAGTTGTCACAAAAGACAGGTTTGCCAAGAAGCCTATATTACCTSCAAATCCAAGTAATTCAAGGAAGTCCTTACCAATACCAAGGAAGTCCTTACCAGCACCAAGGAAGGTATACAGAGCAGATGAAAGTGCTGGAAGTTCTGAAACAGCAAAGGCACGAAGTTCTCTCCCCTCTAAGGCAACAGCAAGTAGAAGAGTTAGTTCCCAGCTAACTAATGCAAGAAACAATGTGCGGAAGATACGAGTGAGTGATGGCTTTACTCAAACGAGTCAATCCAAAGTTTTATATGGATCTTCAAGGAAGTACATCATGCCTCTTAAGACTAAAGTCATCGCTTCTACCAATCACATGACTTTAAAACCTAAATGCATATCAGATCAGAACATATCACAATCAAATGCTACAATATTGTCTCAGGATGAGGAAGCACTTCCATTGCCTCTTCCAGTGAATGGTTTAGAATCAGTTTCCAATGATGCAAATCAAGGATGTGTTCCATCTGATGGAGAGAAAAATTTGGTAGTACATTTGCCAGAACTCATTCTAATGAAAAAGTCAAGACGCAAGAAATCTTATACTAGTTCATTGATGGAAGGATCTAAGCTTCTCAAGCAAACGTGTGAAGTTAGCCAGCAAGATAACCTACCAAATATAGACAATGATTGCAATCATTTAGAAGTACCTGAATATGTTGATGACATATATCAGTACTATTGGGTTAGTGAGGCGCAAAATCCATCTTTGGCAAATTACATGTGCATTCAGACAGAAATTACACCTTATATGCGGGGCATTTTGATCAACTGGTTGATTGAAGTACACATGAAGTTTGATTTGATGCCAGAAACACTATATCTCACAGTTACATTATTAGATCAATATCTTTCCATGGTGAAAATAGAAAAGACAGATATGCAATTAGTTGGTCTTACAGCACTTTTGCTGGCTTCAAAATACGAGGACTTTTGGCATCCTAGAGTCAAAGATTTAATAAGCATCTCTGCTGAGTCATATACAAGAGATCAAATGCTTGGAATGGAGAAGCTTATTCTTAGAAAATTGAAGTTTCGTTTGAATGTTCCTACTCCTTATGTTTTCTTGGTGAGGGGTTGTGCCGAAATGATATTGAAACTCCATAAAGCTGCTAGCATTGGAAAGCTAAAGGTTACATATGAAAAGTACTCAAGAAAGGAGCTACGTTTGGTTGCAGCCGTAAGACCGTTGGATAGCCTTCCCTGA 1758 0.3959 MASSLTGKSREVSSRIPDSREPRPSVGGRNFKVLMENERIKVGNVLMKSVREACATSRTSATVAGNPKGGFKSMDKSNSKYVTSANKNVRKALADVSNVQGNSATNIGRDSSKMKGLAGSNIKKGGGITLRKSFTGIMQRNRSNDVQSDAPKKGIDVRPASKDQKYNSHGGPSVVTKDRFAKKPILPXNPSNSRKSLPIPRKSLPAPRKVYRADESAGSSETAKARSSLPSKATASRRVSSQLTNARNNVRKIRVSDGFTQTSQSKVLYGSSRKYIMPLKTKVIASTNHMTLKPKCISDQNISQSNATILSQDEEALPLPLPVNGLESVSNDANQGCVPSDGEKNLVVHLPELILMKKSRRKKSYTSSLMEGSKLLKQTCEVSQQDNLPNIDNDCNHLEVPEYVDDIYQYYWVSEAQNPSLANYMCIQTEITPYMRGILINWLIEVHMKFDLMPETLYLTVTLLDQYLSMVKIEKTDMQLVGLTALLLASKYEDFWHPRVKDLISISAESYTRDQMLGMEKLILRKLKFRLNVPTPYVFLVRGCAEMILKLHKAASIGKLKVTYEKYSRKELRLVAAVRPLDSLP* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4540 585 MobiDBLite consensus disorder prediction 146 163 - -
Amo19g4540 585 MobiDBLite consensus disorder prediction 133 248 - -
Amo19g4540 585 PANTHER CYCLIN-B3-1-RELATED 168 542 - -
Amo19g4540 585 Gene3D - 406 543 - -
Amo19g4540 585 SMART cyclin_7 441 525 IPR013763 -
Amo19g4540 585 PANTHER CYCLIN-B3-1-RELATED 541 583 - -
Amo19g4540 585 SUPERFAMILY Cyclin-like 396 532 IPR036915 -
Amo19g4540 585 Gene3D - 420 532 - -
Amo19g4540 585 PANTHER CYCLINS 541 583 IPR039361 -
Amo19g4540 585 CDD CYCLIN 435 524 IPR013763 -
Amo19g4540 585 PANTHER CYCLINS 168 542 IPR039361 -
Amo19g4540 585 PIRSF Cyclin_A_B_D_E 541 584 IPR039361 -
Amo19g4540 585 PIRSF Cyclin_A_B_D_E 48 217 IPR039361 -
Amo19g4540 585 PIRSF Cyclin_A_B_D_E 201 548 IPR039361 -
Amo19g4540 585 Pfam Cyclin, N-terminal domain 406 532 IPR006671 -
Amo19g4540 585 MobiDBLite consensus disorder prediction 220 248 - -
Amo19g4540 585 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4540 Amo-Chr19 162746150 162754164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4540 531 585 Core Cell Cycle Gene Families AT1G16330 50.000 2.04e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4540 K21777 - gmx:100808850 521.931