Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4539 ATGTCTTCTGAGGAGGTGGACCTGCTGCTTTCCCTTCAGGATCAGGAGAAGGTTCTCGAAACCCCTCCCGCTTCACCTGGATTCGCCGGTTACCTCTCTGACGATGACCGCCACGATGGAGAAAAGCCTGATATGTCAGTGTTCCGAGACGCTGTTCAGGATTGCCTTCAATATGAACCTAACCCTAACCCTGAGCCTAACCCTAAACCCAAAAGCAAGCCTCTTCTCACCAACGACGCCGATGTTGAGAAGTTTTCAGGTCTCCGAATAAGGAATCAATTGCTKACCTCTAACGAGATTAGAGAATCCTTCTCAGACATTCGTTTTGTTCGCTTATCTGTGATCAAGAATTTGTTGATTGGGGATACTTTTTCCGGAAGTTGGGTGACCGTTGGAGTGTTGACTGAGAAAGGGCCTCCGAGGACGAGTTCAACAGGGAAGACTTATTGCATTTGGAAAGTCGGCTGTCTCGATGAGAATACTGTTTCCTTATTCCTCTTTGGTGATGCTTACCAGAGGAACTCCCAGGAGCAAGTAGGAGCCGTCTTTGCGTTGTTCAATTCTGCTGTCCGCAAAGATCCCAAGGCTAATGGTTTTTCGCTGAGTGTATATTCCTCTGGTCAAATTTTGAAGATGGGCACCTCTGCTGACTATGGAGTTTGTAAAGGCAAAAGAGCAGATGGCATGGCTTGTACCCTTGTCATAAATAAGCGTTCTGGAGCATATTGTAAATATCATAAATCAAAAGCATCGGGGAAATATTCTACAATGAGAACTGAACTCAAGGGAGGAAACTTACACACAGCATTTAGGTCTAGGGATTATCTCAAGTCAGAAGGAATTTACTTAGTTGATCCTCTTGCTGGAAAAGCAAGCTTGAAAAAGTCTCAGCCAWTGAAATTGTTGTCAGTGGATGGACTCAGAAAGGCATTGAGCAACGCAGGAAAAGTAACAACTAAGACACACTCTCAGGGGATTAGATTTCTTGCTGAGGTCACAGGTGATTTGATTATCTTGAAGCTTTAA 1026 0.4464 MSSEEVDLLLSLQDQEKVLETPPASPGFAGYLSDDDRHDGEKPDMSVFRDAVQDCLQYEPNPNPEPNPKPKSKPLLTNDADVEKFSGLRIRNQLLTSNEIRESFSDIRFVRLSVIKNLLIGDTFSGSWVTVGVLTEKGPPRTSSTGKTYCIWKVGCLDENTVSLFLFGDAYQRNSQEQVGAVFALFNSAVRKDPKANGFSLSVYSSGQILKMGTSADYGVCKGKRADGMACTLVINKRSGAYCKYHKSKASGKYSTMRTELKGGNLHTAFRSRDYLKSEGIYLVDPLAGKASLKKSQPXKLLSVDGLRKALSNAGKVTTKTHSQGIRFLAEVTGDLIILKL* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4539 341 Pfam Primase zinc finger 213 258 IPR015408 GO:0005634|GO:0006260
Amo19g4539 341 Gene3D - 75 247 IPR012340 -
Amo19g4539 341 MobiDBLite consensus disorder prediction 32 48 - -
Amo19g4539 341 MobiDBLite consensus disorder prediction 1 78 - -
Amo19g4539 341 PANTHER PROTEIN MCM10 HOMOLOG 34 323 IPR040184 GO:0003690|GO:0003697|GO:0006270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4539 17 332 Core DNA Replication Machinery Family AT2G20980 60.312 2.07e-128 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4539 K10736 - gmx:100527758 465.692