Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4524 ATGAGGAATTGTGATGAATGGAAACCTTTTGTAGTAATGGTAGCAATTGATTTTTGTTTTGCAGCAGTGAATATTATTCTCAAGAAAGTTCTTGAAGAAGGAATGAACCATTTGGTTTTTATTACATACCGTTTATCAATTGCTACCATTCTCTTAGCTCCAATCGGATACTTTAGGGAAAGAAACAGTAGGCCAAGGCTCACATTTCGAGTTCTATGTTACATCTTCTTCAGTGCTATTGTGGGGGCATCAGTGACACAATATTTCTTCCTGCTGGGGATCCAATATACTTCTGCTACCTTTGCTTGTGCATTCATCAACATGGTGCCTGTGATCACGTTCATTATGGCATTACCATTCGGGTTAGAGAGTGTGAAGATCAAGTGCAAGAGTGGGAGAGCGAAGATTCTTGGGACATTGGTGTGCATAGGGGGTGCATTGTTGTTGACACTCTATAAAGGAAAGGCCTTGTTTAACTATTCTTCTGCAACTTCTATAGCAAAGACTGGAACAAGTAGTAGTAGTAGTAGTGGAAGATGGACTATTGGTGTTGTGGCTTTGATTCTTGGAACACTGTTTTGGTCATCTTGGTATATAGTACAATCAAGCATAAGCAAGAGGTTCCCATGTCAATACTCAAGTACAGCCATGATGACCTTCTTTGGAGCCATTCAAGCAGCTTTCATAAGCTTCTCCATTCAACACCATGATTTCTCCATTTGGGTTCTCAAGGGAAAGCTTCCAATAATTGCTGTTCTCTTCTCTGGGATGATTGGATCAGGATTGTGTTTTGTGGGGATGTCATGGTGTGTGAAGAAGAGGGGTCCAGTCTTCACTGCAGCATTCAGCCCTCTTGTTCAGATCATGGCCGCCATGATTGATATCCCTATCTTGCATGAGCAACTACATCTTGGAAGTGTGTTGGGATCAATGTTGGTGATGATGGGATTATACATTCTTCTGTGGGGTAAGAGCAAGGAGATTCAGAATCGTGTTATCAAGTTAGTCCAAGACTCTGAACAAAGTCAACAAACCAAGGAACAAGATCCGGAAATACAAGAAGCTACGGTTTCTTGTGATTACCAGTGTCACTAA 1095 0.4128 MRNCDEWKPFVVMVAIDFCFAAVNIILKKVLEEGMNHLVFITYRLSIATILLAPIGYFRERNSRPRLTFRVLCYIFFSAIVGASVTQYFFLLGIQYTSATFACAFINMVPVITFIMALPFGLESVKIKCKSGRAKILGTLVCIGGALLLTLYKGKALFNYSSATSIAKTGTSSSSSSGRWTIGVVALILGTLFWSSWYIVQSSISKRFPCQYSSTAMMTFFGAIQAAFISFSIQHHDFSIWVLKGKLPIIAVLFSGMIGSGLCFVGMSWCVKKRGPVFTAAFSPLVQIMAAMIDIPILHEQLHLGSVLGSMLVMMGLYILLWGKSKEIQNRVIKLVQDSEQSQQTKEQDPEIQEATVSCDYQCH* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4524 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
Amo19g4524 364 PANTHER WAT1-RELATED PROTEIN 9 347 IPR030184 GO:0016021|GO:0022857
Amo19g4524 364 Pfam EamA-like transporter family 12 150 IPR000620 GO:0016020|GO:0016021
Amo19g4524 364 Pfam EamA-like transporter family 182 321 IPR000620 GO:0016020|GO:0016021
Amo19g4524 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 326 - -
Amo19g4524 364 PANTHER WAT1-RELATED PROTEIN 9 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4524 Amo-Chr19 162504703 162508977 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4524 6 329 Nodulin-like Gene Family AT1G11460 38.769 5.92e-86 261