Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4514 ATGAACGGCGCAGGGCCCACAGCCACAGCCACAGCCACCGCCACTGCCACCGCCACCTTCAGGTCTATCCTCGACAAGCCCCTTCACCAGCTCACCGAAGATGACATTTCCCAACTCACTCGCGAAGACTGTCGCAGATTCCTCAAAGAAAAAGGGATGCGCAGGCCTTCGTGGAACAAATCGCAGGCAATTCAGCAGGTCATTTCCCTGAAGGCGCTGCTCGAGCCCTCCAACGACGACGCCCCCGCCGTCGTTCCCACCCTCCATTCTACCTCTCCACCTCGGCCTCCGCCTCAGCCTCAAGGGGATTTGAACGATGCTCCGCCCGCTGAAGATCCGGCTCTTCATGCTGCCGATGACATTCAGAAATCTGCGTCGTCTCCCGAAAAACCCACTGAAACCAATGACACCAACGTTGTCAGCCCCAGAGCATGTGCAACTAGCGGAGTTGGGCAAATGACGATATTCTACTGTGGTAAGGTGAATGTCTATGATGGAGTCTCACCTGATAAGGCACAGGCTATCATGCAACTTGCAGCAAGTCCAGTCCAATTTGCTCAGGAGGATCCTGTAAACAGAAATACAACAGTCTGGGTTTCTCCTTGTCACATACCATTGGATAAGGATGTCCCAGTTCCTGTTGATACAACAATGGTGCAGGTTGCTCAAGCAGATAAGATGATGGAATATCCTCTGCATTACAGGGAGAAGGGAATCATAGCTCGTGATGCTGATCTAGATGGTCAGGCAAGCAGACAAGTTTCATTGCAACGATATCGTGAAAAGCGAAAAGACAGGGGAAGATTGAAGGGCAAGAAATTGCCTGGGGTAACGTCATCTAACTTGGAGATGTATTTGCTTCCACCGAAAATCCAGACCTCAAATGGCAATTCAAGCCGAAGTAGCACATGCTCCCCACCACAGCCTAGACCGCCTCTTGCTTTCAGTGGCTCGGCTGACAACCCGCTAAAAGTTGGCCTTCCCATTGATCTCAATGACAAAGATGTTCAAGAATGCTAA 1020 0.5127 MNGAGPTATATATATATATFRSILDKPLHQLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQVISLKALLEPSNDDAPAVVPTLHSTSPPRPPPQPQGDLNDAPPAEDPALHAADDIQKSASSPEKPTETNDTNVVSPRACATSGVGQMTIFYCGKVNVYDGVSPDKAQAIMQLAASPVQFAQEDPVNRNTTVWVSPCHIPLDKDVPVPVDTTMVQVAQADKMMEYPLHYREKGIIARDADLDGQASRQVSLQRYREKRKDRGRLKGKKLPGVTSSNLEMYLLPPKIQTSNGNSSRSSTCSPPQPRPPLAFSGSADNPLKVGLPIDLNDKDVQEC* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4514 339 MobiDBLite consensus disorder prediction 78 142 - -
Amo19g4514 339 MobiDBLite consensus disorder prediction 250 339 - -
Amo19g4514 339 MobiDBLite consensus disorder prediction 285 304 - -
Amo19g4514 339 Pfam Jas motif 249 266 IPR018467 -
Amo19g4514 339 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 17 313 IPR040390 -
Amo19g4514 339 MobiDBLite consensus disorder prediction 125 142 - -
Amo19g4514 339 Pfam tify domain 151 180 IPR010399 -
Amo19g4514 339 MobiDBLite consensus disorder prediction 89 104 - -
Amo19g4514 339 PANTHER PROTEIN TIFY 4B-LIKE ISOFORM X1 17 313 - -
Amo19g4514 339 SMART tify_2 146 181 IPR010399 -
Amo19g4514 339 ProSiteProfiles Tify domain profile. 146 181 IPR010399 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4514 15 286 Tify Gene Family AT4G14720 46.392 8.09e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Amo19g4514 tify 1.4e-16 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4514 19 162409791 162414125 Amo19g4514 19 162409791 162414125 ECH