Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4485 ATGGCGCTCTTGTTCGCTTTCCCAATCCCACACTCCAATTACAGTGCTGACATGACAATAATAACAGCATTATTGTGCTTACATCTTCTCCTCTTCACAGTAATAAGAGTGAACTCAATGGAACCCTCATCATCATCTGAGGATCCCTACAAGATTCTCAACATAATCCCCAACCCAGACGGCACCTTCACCCGCCTCCAAAACTATCCAGAGACCCCTCCCTCACCAGATCCCACTCTCCCCATACCCGTTCTCTCCAAGGACCTTACCATCGACCAATCCAAGCACACCTGGGCGCGGATCTACCTACCCCGCCAAGCACTCAATACTCCCCCTAACCACCCCAACCTTCCCCTCATCGTCTTCTACCATGGCGGCGGTTTCATATTCTACCATGCCAACTCCACCTACTTCCACGACTTCTGCGTCCGCATGGCCAACGCCACCCAATCCGTCGTCGTTTCCGTCGATTACCGCCTTGCTCCGGAGCACCGCTTGCCGGCGGCGTACGAGGACTCGGTGCAGGCGCTGCACTGGATCAGAGCCTCCAATGACTTGTGGCTGGCTCACGCTGATTTCTCCCGATGCTATCTCATGGGAGAGAGTGCTGGAGGAAACATAGCGTACAACGCGGGTCTACGTGCAGCCGCGGAGGCAGACCAGATCAGGCCGCTCAAGATCAAAGGGATGATATTGATTCAGCCGTTTTTCGGAGGGAAGAAAAGAACTCCGTCGGAGCTGAGGCTAGCGAAGGACTTGAACTTGCCACTGACGGTTACGGATTCCATGTGGAAACTGTCGCTGCCAGTTGGCGTTGACCGGGATCACGAGTATTCGAATCCAACGGTGAATGGAGGGGCAAAGGTGTTGGCTAGTATAAGGGAGCTTGAGTGGAGGCTGGTGGACCGCCAGAAGGAGCTCGTGAAGCTGCTAAAGGACAAGAGAGTGAATGTGGTGGGCCAGTTTTATAATGCTGGTCGCCATGGCATTTTTGTTGGTGATGCTTCCATGTCCACCAAAGTCTTCCATTTACTTAAAACTCTTCATTGA 1050 0.5295 MALLFAFPIPHSNYSADMTIITALLCLHLLLFTVIRVNSMEPSSSSEDPYKILNIIPNPDGTFTRLQNYPETPPSPDPTLPIPVLSKDLTIDQSKHTWARIYLPRQALNTPPNHPNLPLIVFYHGGGFIFYHANSTYFHDFCVRMANATQSVVVSVDYRLAPEHRLPAAYEDSVQALHWIRASNDLWLAHADFSRCYLMGESAGGNIAYNAGLRAAAEADQIRPLKIKGMILIQPFFGGKKRTPSELRLAKDLNLPLTVTDSMWKLSLPVGVDRDHEYSNPTVNGGAKVLASIRELEWRLVDRQKELVKLLKDKRVNVVGQFYNAGRHGIFVGDASMSTKVFHLLKTLH* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4485 349 Gene3D alpha/beta hydrolase 50 347 IPR029058 -
Amo19g4485 349 Pfam alpha/beta hydrolase fold 120 331 IPR013094 GO:0016787
Amo19g4485 349 PANTHER CARBOXYLESTERASE 120-RELATED 45 342 - -
Amo19g4485 349 PANTHER ARYLACETAMIDE DEACETYLASE 45 342 - -
Amo19g4485 349 SUPERFAMILY alpha/beta-Hydrolases 48 333 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4485 Amo-Chr19 161883897 161884976 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4485 74 281 Carbohydrate Esterase AT1G68620 45.327 4.42e-56 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4485 - - adu:107467054 677.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4485 19 161883897 161884976 Amo19g4485 19 161883897 161884976 ECH
Amo19g4485 19 161883897 161884976 Amo19g4485 19 161883897 161884976 PCT