Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4479 ATGGGGAAGGACTATTGGTGGTATTGGCCTGCTCCTGCATTTGGAAGGTCCTCTTCCTCCTCCACCTCCACCTCCACCTCCTCCTCCAAGGCTTCTACTTCTTCTGGTTGCATGTGTTCTCTCTTTCAAACCTTCCATTTCCATCCATTTCACTTTTCCATAAACCAACATCAACACAAGTCTCCCTCTTCCATCTCACAATGTCTCTCCAAAGATGGTGCTGAAGGACCAAGGAATAGCTTGGAATCACAACATGGTACTGCCTCCTCAAAAGAACAACAACATTTACAAATTCCGAAGAACATTCGAATCAAAACAAGCAGAAGCATGACAAGAACAAGATCAGGAAATTATTCGAGTGATTTCTCCTCGGAAATGAGCTTCTCTCCGGGAACCAAGACACCAACATTGGTTGCAAGATTGATGGGGCTTGATCTTCTTCCTGAAAACAACTCTTCCTCTCCTAATTCCTCCTCTTCTTCAACCCTCTCCACTCCAATAATTAATAACAAACATGGAAGAAGCAACAACAATAACAATAATCCACAGGTTCATCATCATAACCCTAAAGCAAGGCACCAGCATCACCACATCCAAATAATGAGACACAGACACAGCACAGACAGCATAGGAACCATTCGTTCCTTGTCTGATACTCCAAGAAGATCAGATGTTGAGCATAGTAGACTCTCTTTGCAAATCAACAAGGAGAACATTGGGGTTGATGAGAACTACTTGGAAGCCCCTCGCTTCTCATTTTCAAAGAGGAAATTTGATGAGAACAACAACAATAGTAGTAGCAGCAGAAGTCCAAGCCACTATGCAAGGCAAATTGTGAAGCAGGTTAAGGAAAGTGTAAGCAGGAGAGTTGGGATAACTGACATAACCAACACTGTTAAGAACAGAGAGCAAGAATCTTCTGTGGTCCAACAAATCAGATTCAAGAAAGCTACAAAGACAAGTAGTAATGTGAATGTGAATGTGAATGTGATTGTGAATGAAGCTTGCAGCCCGGGGAAGCAGTCTCCAAGACTCAGCAGATTCGTTGACTCCAAACAGAATAACCCAAACAGCATCACAAAACCATCATCACCTCTTACCCCAAAAGATCAAAAGCCGTTATCATCGTCACCTACTACTACTCCACTTCCTATTGCTCACCAGACTGAAACACAATTAAGCTCAAAAGATGATTTGCAGAGCAAAAAGTCATCATCAGCTCCAAAATGCAAGAGAAGCAGGACTACTGAGAAGTTGGGATCAGGGGTGAATAGGACTACTGCTCCACAGACATCATCAATAAGAAAGAAGCAACAAGAGTCATTTGTTTCCTGTACACTCTCACCAACAAGACCCAAAACCAAGAACAGATCAACTCATCCACTTTCAAGCAACCTTCTTCTCAATACAGCTCCAAATCTTCTCCCTGTCAAGACTCACCCTTCTCCTCTCCCAACTAAAATCCCCCAAAAACAGCCATGTGATACTCAAGAACAAAAACGCAGCAGCGCACAGTTATCAAGTTGTGCCCGCCAGAAGTACAAAAAAGATGCAATTCAAACACCCGCCACCGCCACAACCGCCGGCACCGCCACCACCGCAGCCGACGATCAAGGACCAGAATTTGAGTACATCACAAGCATACTAAGCCGCACGGGGTTGCGCAAAGCTACGTTACCCCAAATCCAATACCAATGGTTCTCTCTTTCCCACCCATTAGACCCTTCACTCTTTCACAACCTCGAGCATCACTACCCATCATCCAATCCAGACAAAGGTTGCATCTTTACGCAGAGGGACCAACTGGGTCTTCGCTGTAACCGGAGACTACTATTCGACTTGGTCGATGAACTGCTGTCGGAGATTCTGGCAAGACGAAAACACGAGGGTGGGTTGTTGGTGGAGACAGTGTGGAGGAAGGTTCGGAGTTTCCCAGGTGCGAAGTGTGAGGTTCTGGAGGATATTGATGGGTTGATAGAAATGGAGGAGATGGAGAGGAAGGTGAAGGAGGAAAGAGAAGAAGGGTTGGTGATGGAGATTGGAAGGAGCATAATGGAGACGTTGGTGCATGAAACTGTTACCGTCTTCATGCTTTGA 2097 0.4502 MGKDYWWYWPAPAFGRSSSSSTSTSTSSSKASTSSGCMCSLFQTFHFHPFHFSINQHQHKSPSSISQCLSKDGAEGPRNSLESQHGTASSKEQQHLQIPKNIRIKTSRSMTRTRSGNYSSDFSSEMSFSPGTKTPTLVARLMGLDLLPENNSSSPNSSSSSTLSTPIINNKHGRSNNNNNNPQVHHHNPKARHQHHHIQIMRHRHSTDSIGTIRSLSDTPRRSDVEHSRLSLQINKENIGVDENYLEAPRFSFSKRKFDENNNNSSSSRSPSHYARQIVKQVKESVSRRVGITDITNTVKNREQESSVVQQIRFKKATKTSSNVNVNVNVIVNEACSPGKQSPRLSRFVDSKQNNPNSITKPSSPLTPKDQKPLSSSPTTTPLPIAHQTETQLSSKDDLQSKKSSSAPKCKRSRTTEKLGSGVNRTTAPQTSSIRKKQQESFVSCTLSPTRPKTKNRSTHPLSSNLLLNTAPNLLPVKTHPSPLPTKIPQKQPCDTQEQKRSSAQLSSCARQKYKKDAIQTPATATTAGTATTAADDQGPEFEYITSILSRTGLRKATLPQIQYQWFSLSHPLDPSLFHNLEHHYPSSNPDKGCIFTQRDQLGLRCNRRLLFDLVDELLSEILARRKHEGGLLVETVWRKVRSFPGAKCEVLEDIDGLIEMEEMERKVKEEREEGLVMEIGRSIMETLVHETVTVFML* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4479 698 MobiDBLite consensus disorder prediction 62 131 - -
Amo19g4479 698 Pfam Domain of unknown function (DUF4378) 541 691 IPR025486 -
Amo19g4479 698 MobiDBLite consensus disorder prediction 402 418 - -
Amo19g4479 698 MobiDBLite consensus disorder prediction 337 508 - -
Amo19g4479 698 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 696 - -
Amo19g4479 698 MobiDBLite consensus disorder prediction 186 202 - -
Amo19g4479 698 MobiDBLite consensus disorder prediction 147 185 - -
Amo19g4479 698 Pfam DUF761-associated sequence motif 123 153 IPR032795 -
Amo19g4479 698 MobiDBLite consensus disorder prediction 80 131 - -
Amo19g4479 698 MobiDBLite consensus disorder prediction 489 508 - -
Amo19g4479 698 MobiDBLite consensus disorder prediction 419 476 - -
Amo19g4479 698 MobiDBLite consensus disorder prediction 337 401 - -
Amo19g4479 698 MobiDBLite consensus disorder prediction 256 275 - -
Amo19g4479 698 MobiDBLite consensus disorder prediction 147 228 - -
Amo19g4479 698 PANTHER DUF4378 DOMAIN PROTEIN 1 696 - -
Amo19g4479 698 MobiDBLite consensus disorder prediction 258 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4479 Amo-Chr19 161837106 161839661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4479 111 697 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 32.759 4.53e-49 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4479 - - adu:107466876 1170.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4479 19 161837106 161839661 Amo19g4479 19 161837106 161839661 ECH
Amo19g4479 19 161837106 161839661 Amo09g2833 09 107460299 107462489 hybridization
Amo19g4479 19 161837106 161839661 Amo19g4479 19 161837106 161839661 PCT
Amo09g2833 09 107460299 107462489 Amo19g4479 19 161837106 161839661 PCT
Amo19g4479 19 161837106 161839661 Amo09g2833 09 107460299 107462489 PCT